HHsearch alignment for GI: 254780721 and conserved domain: COG1459

>COG1459 PulF Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=98.85  E-value=1.1e-05  Score=55.73  Aligned_cols=55  Identities=20%  Similarity=0.125  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             9999999999996599989999999986399589999999999997199589999999
Q gi|254780721|r  218 LSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRNATQALIQSDRYGTSIGDSLRVL  275 (329)
Q Consensus       218 l~~e~~~~~~~~~~G~~~~~Al~~~a~r~~~~~~~~~~~~l~~~~~~G~~l~~~L~~~  275 (329)
T Consensus       266 f~rtl~~L---l~sGvpl~~aL~i~~~~~~~~~~~~~~~~~~~~v~~G~sl~~al~~~  320 (397)
T COG1459         266 FARTLGTL---LSSGVPLLEALDIAAETVSNAFLRQALEEIIQEVREGGSLSQALEKT  320 (397)
T ss_pred             HHHHHHHH---HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHC
T ss_conf             99999999---97898399999998762374999999999999998575699998736