HHsearch alignment for GI: 254780721 and conserved domain: COG2064
>COG2064 TadC Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=99.95 E-value=3.7e-23 Score=171.34 Aligned_cols=313 Identities=31% Similarity=0.393 Sum_probs=231.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999607660899999999877887654432100012456775654457899998520000
Q gi|254780721|r 12 TELAVAITTAVSIFSLIYAVVIPSLGSGELEKRMKSVAVEREILRKQQITSLQKDSASSRLRTRDSKSLRNFVKKLNLKA 91 (329)
Q Consensus 12 ~~lli~il~~i~v~~~i~~l~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (329)
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T COG2064 5 AELYLTFLVARPLFALAILVVMAVLKRKELLLLLKGVDREIPRIILLSLIRLLIGSV--SIRELLAFLLRKIISGLLLFF 82 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHH
T ss_conf 789999998999999999999998264017999987898700566899998864311--002057899999999988877
Q ss_pred CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12556999999967999867589999999999999999999-99999732001215899999999999999999999999
Q gi|254780721|r 92 ILVDENIVNKLRAAGFRSEYSLNILLVVRLVVPIIFLILGI-IWIFGYDKLLEYPFQLRVGAVILIGYVGFCAPSVWISN 170 (329)
Q Consensus 92 ~~~~~~l~~~L~~AG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~P~~~l~~ 170 (329)
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~p~i~~~~ 162 (320)
T COG2064 83 GGEDSKPRFKLVEALYRLELALPLFLFALLLALFLGVLLSLPILLLVLGSFIILPLSDFLAIALLISLLGLPLPFILFSL 162 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 76677898889999998850340899999999999999999999999987300229999999999988144207899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH
Q ss_conf 99999999999999999999999974996899999999840778778999999999999659998999999998639958
Q gi|254780721|r 171 LVQKRQSSIKRAWPDALDLLLICVESGISIDQALRRVAEDIGGQSVPLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDC 250 (329)
Q Consensus 171 ~~~~r~~~i~~~lP~~ld~l~~~~~aG~~l~~Al~~va~e~~~~~~~l~~e~~~~~~~~~~G~~~~~Al~~~a~r~~~~~ 250 (329)
T Consensus 163 ~~~~r~~~i~~~~p~~l~~~~~~~~~G~~l~~al~~va~~~~~~-~~l~~~~~~~~~~~~~g~~~~~al~~~~~~~~~~~ 241 (320)
T COG2064 163 ALKKRLKEIARELPDFLRLMAVCLEAGLSLADALKRVADELYGQ-RILAEELARTTAELSLGLSIEEALIRLAVRLGSDE 241 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99862135899889999999999882878999999998733233-88999999999998769977999999987443499
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999997199589999999999-9999999999999843336999999999999999999779999999973
Q gi|254780721|r 251 VRNATQALIQSDRYGTSIGDSLRVLVSE-TRSERLMEAEKKAASLGPKLTVPMIIFFLPVLILVIIGPAILSIIDTMK 327 (329)
Q Consensus 251 ~~~~~~~l~~~~~~G~~l~~~L~~~a~~-~r~~~~~~~e~~a~~~~~k~~~~~il~~~p~~~~~~~~P~~~~~~~~~~ 327 (329)
T Consensus 242 ~~~~~~~l~~~~~~g~~l~~~l~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~ 319 (320)
T COG2064 242 VKRVVSLLTQALESGGSLADALRVLSMELSRETRLKLGEIRAGKIGVGILLPLILVIIPVLLFVVILPAILGIASSGG 319 (320)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999998833209999999999999998899998899988879999999999999999999888999998615