HHsearch alignment of GI: 254780721 and MMDB domain: 3c1q_A_

>3c1q_A (A:) General secretion pathway protein F; type 2 secretion system, T2SS, T4PB, inner membrane, membrane, transmembrane, transport protein; HET: MSE PE5; 1.70A {Vibrio cholerae} PDB: 2vmb_A* 2vma_A*
Probab=93.90  E-value=0.37  Score=25.32  Aligned_cols=79  Identities=13%  Similarity=0.017  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Q ss_conf             899999999999965999899999999863995899999999999971995899999999999--999999999999843
Q gi|254780721|r  217 PLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRNATQALIQSDRYGTSIGDSLRVLVSET--RSERLMEAEKKAASL  294 (329)
Q Consensus       217 ~l~~e~~~~~~~~~~G~~~~~Al~~~a~r~~~~~~~~~~~~l~~~~~~G~~l~~~L~~~a~~~--r~~~~~~~e~~a~~~  294 (329)
                      .+..-+..+..=++.|.|..+|++.+++.++.|.++.-...+....+.|.+++++|..++..+  ........-++.+.+
T Consensus        13 ~~~~f~~~l~~ll~~G~~l~~al~~~~~~~~~~~l~~~~~~i~~~l~~G~~~~~Al~~~~~~~~~~~~~~i~~ge~~G~L   92 (123)
T 3c1q_A           13 DLALITRQLATLVQSGXPLEECLRAVAEQSEKPRIRTXLVAVRAKVTEGYTLSDSLGDYPHVFDELFRSXVAAGEKSGHL   92 (123)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHHHTCSCHHHHHHHHHHHHHHHTTCCHHHHHTTCTTTSCHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH
T ss_conf             99999999999998699899999999714412899999999999998455399999875455869999999999874779


Q ss_pred             H
Q ss_conf             3
Q gi|254780721|r  295 G  295 (329)
Q Consensus       295 ~  295 (329)
                      +
T Consensus        93 ~   93 (123)
T 3c1q_A           93 D   93 (123)
T ss_dssp             H
T ss_pred             H
T ss_conf             9