HHsearch alignment of GI: 254780721 and MMDB domain: 3c1q_A_
>3c1q_A (A:) General secretion pathway protein F; type 2 secretion system, T2SS, T4PB, inner membrane, membrane, transmembrane, transport protein; HET: MSE PE5; 1.70A {Vibrio cholerae} PDB: 2vmb_A* 2vma_A*
Probab=93.90 E-value=0.37 Score=25.32 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Q ss_conf 899999999999965999899999999863995899999999999971995899999999999--999999999999843
Q gi|254780721|r 217 PLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRNATQALIQSDRYGTSIGDSLRVLVSET--RSERLMEAEKKAASL 294 (329)
Q Consensus 217 ~l~~e~~~~~~~~~~G~~~~~Al~~~a~r~~~~~~~~~~~~l~~~~~~G~~l~~~L~~~a~~~--r~~~~~~~e~~a~~~ 294 (329)
.+..-+..+..=++.|.|..+|++.+++.++.|.++.-...+....+.|.+++++|..++..+ ........-++.+.+
T Consensus 13 ~~~~f~~~l~~ll~~G~~l~~al~~~~~~~~~~~l~~~~~~i~~~l~~G~~~~~Al~~~~~~~~~~~~~~i~~ge~~G~L 92 (123)
T 3c1q_A 13 DLALITRQLATLVQSGXPLEECLRAVAEQSEKPRIRTXLVAVRAKVTEGYTLSDSLGDYPHVFDELFRSXVAAGEKSGHL 92 (123)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHTCSCHHHHHHHHHHHHHHHTTCCHHHHHTTCTTTSCHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 99999999999998699899999999714412899999999999998455399999875455869999999999874779
Q ss_pred H
Q ss_conf 3
Q gi|254780721|r 295 G 295 (329)
Q Consensus 295 ~ 295 (329)
+
T Consensus 93 ~ 93 (123)
T 3c1q_A 93 D 93 (123)
T ss_dssp H
T ss_pred H
T ss_conf 9