BLAST/PSIBLAST alignment of GI: 254780721 and GI: 241207162 at iteration 1
>gi|241207162|ref|YP_002978258.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328
>gi|240861052|gb|ACS58719.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328
 Score =  346 bits (887), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 171/311 (54%), Positives = 233/311 (74%), Gaps = 2/311 (0%)

Query: 16  VAITTAVSIFSLIYAVVIPSLGSGELEKRMKSVAVEREILRKQQITSLQKDSASSR--LR 73
           +A+  A+++F+  Y + IP    G+L KRMK+V+ ERE +R ++   +  ++ + +  LR
Sbjct: 16  IALFVAIAVFATFYTIAIPFFERGDLNKRMKAVSTEREQIRARERARMNTETGAGKASLR 75

Query: 74  TRDSKSLRNFVKKLNLKAILVDENIVNKLRAAGFRSEYSLNILLVVRLVVPIIFLILGII 133
            ++++S+R  V++ NL+  LVDEN VNKLRAAGFRSE +LN  LV R ++P +FL L  +
Sbjct: 76  NQNNRSVRQIVERFNLRKALVDENTVNKLRAAGFRSENALNTFLVARFLLPFLFLTLAAV 135

Query: 134 WIFGYDKLLEYPFQLRVGAVILIGYVGFCAPSVWISNLVQKRQSSIKRAWPDALDLLLIC 193
           W+FG   L E    +R+ AVI +GY+GF AP+++ISN + KRQ SIKRAWPDALDL+LIC
Sbjct: 136 WVFGLGNLAEKGTPIRLFAVIGVGYLGFYAPNIFISNRMGKRQHSIKRAWPDALDLMLIC 195

Query: 194 VESGISIDQALRRVAEDIGGQSVPLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRN 253
           VESGISI+ A+RRV+E++G QS  L+EEM+LT AELSFLP+R+ A EN   RTQ++ VR+
Sbjct: 196 VESGISIEAAMRRVSEELGEQSPALAEEMVLTTAELSFLPDRRAALENLATRTQIELVRS 255

Query: 254 ATQALIQSDRYGTSIGDSLRVLVSETRSERLMEAEKKAASLGPKLTVPMIIFFLPVLILV 313
            TQALIQ+DRYGT +  +LRVL  E R ER+ EAEKKAA+L PKLTVPMI+FFLPVLI V
Sbjct: 256 VTQALIQADRYGTPVAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMILFFLPVLIAV 315

Query: 314 IIGPAILSIID 324
           I+GPA + + D
Sbjct: 316 ILGPAGIQVAD 326