BLAST/PSIBLAST alignment of GI: 254780721 and GI: 241207162 at iteration 1
>gi|241207162|ref|YP_002978258.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328
>gi|240861052|gb|ACS58719.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328
Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/311 (54%), Positives = 233/311 (74%), Gaps = 2/311 (0%)
Query: 16 VAITTAVSIFSLIYAVVIPSLGSGELEKRMKSVAVEREILRKQQITSLQKDSASSR--LR 73
+A+ A+++F+ Y + IP G+L KRMK+V+ ERE +R ++ + ++ + + LR
Sbjct: 16 IALFVAIAVFATFYTIAIPFFERGDLNKRMKAVSTEREQIRARERARMNTETGAGKASLR 75
Query: 74 TRDSKSLRNFVKKLNLKAILVDENIVNKLRAAGFRSEYSLNILLVVRLVVPIIFLILGII 133
++++S+R V++ NL+ LVDEN VNKLRAAGFRSE +LN LV R ++P +FL L +
Sbjct: 76 NQNNRSVRQIVERFNLRKALVDENTVNKLRAAGFRSENALNTFLVARFLLPFLFLTLAAV 135
Query: 134 WIFGYDKLLEYPFQLRVGAVILIGYVGFCAPSVWISNLVQKRQSSIKRAWPDALDLLLIC 193
W+FG L E +R+ AVI +GY+GF AP+++ISN + KRQ SIKRAWPDALDL+LIC
Sbjct: 136 WVFGLGNLAEKGTPIRLFAVIGVGYLGFYAPNIFISNRMGKRQHSIKRAWPDALDLMLIC 195
Query: 194 VESGISIDQALRRVAEDIGGQSVPLSEEMLLTIAELSFLPNRQVAFENFYNRTQMDCVRN 253
VESGISI+ A+RRV+E++G QS L+EEM+LT AELSFLP+R+ A EN RTQ++ VR+
Sbjct: 196 VESGISIEAAMRRVSEELGEQSPALAEEMVLTTAELSFLPDRRAALENLATRTQIELVRS 255
Query: 254 ATQALIQSDRYGTSIGDSLRVLVSETRSERLMEAEKKAASLGPKLTVPMIIFFLPVLILV 313
TQALIQ+DRYGT + +LRVL E R ER+ EAEKKAA+L PKLTVPMI+FFLPVLI V
Sbjct: 256 VTQALIQADRYGTPVAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMILFFLPVLIAV 315
Query: 314 IIGPAILSIID 324
I+GPA + + D
Sbjct: 316 ILGPAGIQVAD 326