HHsearch alignment for GI: 254780722 and conserved domain: COG1459
>COG1459 PulF Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=99.68 E-value=3.4e-14 Score=106.57 Aligned_cols=136 Identities=18% Similarity=0.339 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999999999999995699989999999992484-289999999998630388889999977534873479999999998
Q gi|254780722|r 13 LDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSD-PVRSEFRRVIETQHLGLSLSESISRMVRYMPLQEVSFFSTVISVQ 91 (187)
Q Consensus 13 ~~~l~~~l~~l~~~l~aG~sl~~Al~~~a~~~~~-~l~~e~~~i~~~~~~G~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 91 (187)
T Consensus 57 ~~~l~~f~~qLa~Ll~aG~pL~~aL~~l~~q~~~~~~~~~l~~i~~~l~~G~sls~al~~~~~~F-----~~~~~~~v~~ 131 (397)
T COG1459 57 KKDLALFTRQLATLLKAGLPLYEALEILADQAPNPKLKQVLTSILEELESGKSLSEALAQLPGVF-----PDLYVAMVAA 131 (397)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC-----CHHHHHHHHH
T ss_conf 89999999999999977880999999998618887899999999999977883899997676658-----9799999999
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 74257468999999999999999999999986434567799999999999999997878999995
Q gi|254780722|r 92 SQLGGNLSEALANLSRILRDRKNMKAKVQALSMEAKASAWIIGSLPFCVSTLVYFTSPGYMNVLI 156 (187)
Q Consensus 92 ~~~gg~~~~~L~~la~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 156 (187)
T Consensus 132 gE~~G~L~~~l~~la~y~e~~~~lr~Ki~~Al~YP---~vll~v~~~v~~~Ll~~VvP~f~~if~ 193 (397)
T COG1459 132 GERSGNLDEVLQRLAKYLEKQAALRKKIKSALIYP---LVLLVVALVVVLFLLIFVVPQFAEIFE 193 (397)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 97148779999999999999999999999998732---999999999999999987136899986