HHsearch alignment for GI: 254780722 and conserved domain: COG1459

>COG1459 PulF Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=99.68  E-value=3.4e-14  Score=106.57  Aligned_cols=136  Identities=18%  Similarity=0.339  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             9999999999999995699989999999992484-289999999998630388889999977534873479999999998
Q gi|254780722|r   13 LDDFPNALDIIVRSVRAGLPVSDAVAVIVGQSSD-PVRSEFRRVIETQHLGLSLSESISRMVRYMPLQEVSFFSTVISVQ   91 (187)
Q Consensus        13 ~~~l~~~l~~l~~~l~aG~sl~~Al~~~a~~~~~-~l~~e~~~i~~~~~~G~~~~~al~~~~~~~~~~~~~~~~~~l~~~   91 (187)
T Consensus        57 ~~~l~~f~~qLa~Ll~aG~pL~~aL~~l~~q~~~~~~~~~l~~i~~~l~~G~sls~al~~~~~~F-----~~~~~~~v~~  131 (397)
T COG1459          57 KKDLALFTRQLATLLKAGLPLYEALEILADQAPNPKLKQVLTSILEELESGKSLSEALAQLPGVF-----PDLYVAMVAA  131 (397)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC-----CHHHHHHHHH
T ss_conf             89999999999999977880999999998618887899999999999977883899997676658-----9799999999


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf             74257468999999999999999999999986434567799999999999999997878999995
Q gi|254780722|r   92 SQLGGNLSEALANLSRILRDRKNMKAKVQALSMEAKASAWIIGSLPFCVSTLVYFTSPGYMNVLI  156 (187)
Q Consensus        92 ~~~gg~~~~~L~~la~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~  156 (187)
T Consensus       132 gE~~G~L~~~l~~la~y~e~~~~lr~Ki~~Al~YP---~vll~v~~~v~~~Ll~~VvP~f~~if~  193 (397)
T COG1459         132 GERSGNLDEVLQRLAKYLEKQAALRKKIKSALIYP---LVLLVVALVVVLFLLIFVVPQFAEIFE  193 (397)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             97148779999999999999999999999998732---999999999999999987136899986