RPSBLAST alignment of GI: 254780722 and protein with PDBid: 3c1q

>3c1q_A General secretion pathway protein F; type 2 secretion system, T2SS, T4PB, inner membrane, membrane, transmembrane, transport protein; HET: MSE PE5; 1.70A {Vibrio cholerae} PDB: 2vmb_A* 2vma_A* Length = 123
 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 6/99 (6%)

Query: 27  VRAGLPVSDAVAVIVGQSSDPV-RSEFRRVIETQHLGLSLSESISRMVRYMPLQEVSFFS 85
           V++G+P+ + +  +  QS  P  R+    V      G +LS+S+              F 
Sbjct: 25  VQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGDYPHVFD----ELFR 80

Query: 86  TVISVQSQLGGNLSEALANLSRILRDRKNMKAKVQALSM 124
           ++++   +  G+L   L  L+    +R+ M++K+Q  S 
Sbjct: 81  SMVAAGEK-SGHLDSVLERLADYAENRQKMRSKLQQASE 118