BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780723|ref|YP_003065136.1| hypothetical protein CLIBASIA_03050 [Candidatus Liberibacter asiaticus str. psy62] (137 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780723|ref|YP_003065136.1| hypothetical protein CLIBASIA_03050 [Candidatus Liberibacter asiaticus str. psy62] gi|254040400|gb|ACT57196.1| hypothetical protein CLIBASIA_03050 [Candidatus Liberibacter asiaticus str. psy62] Length = 137 Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL Sbjct: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 Query: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF Sbjct: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 Query: 121 TFLCVSVSSALVFPRFF 137 TFLCVSVSSALVFPRFF Sbjct: 121 TFLCVSVSSALVFPRFF 137 >gi|315121887|ref|YP_004062376.1| pilus assembly protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495289|gb|ADR51888.1| pilus assembly protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 328 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 3/137 (2%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVIN-PGDSKSQDNAKVVRADR--VIPTANTKRRK 58 D+NS+ LVGLI++SVF LY + + S+S+D KV++ + IP+A KRRK Sbjct: 3 LDINSFLLVGLISISVFFLLYFLLFKTTGLESSSESRDPKKVIKDKKNDTIPSAAVKRRK 62 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 LR+A+ KIEL+HK K GNTKS+ SLIS SG+P SK+H+YI SCV+G + G++SL L SS Sbjct: 63 VLRDAMDKIELSHKEKFGNTKSLSSLISYSGIPFSKEHFYIFSCVMGLVFGIISLALFSS 122 Query: 119 FFTFLCVSVSSALVFPR 135 FF LCV +SSALV PR Sbjct: 123 FFVSLCVCLSSALVVPR 139 >gi|170740617|ref|YP_001769272.1| type II secretion system protein [Methylobacterium sp. 4-46] gi|168194891|gb|ACA16838.1| type II secretion system protein [Methylobacterium sp. 4-46] Length = 322 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/140 (21%), Positives = 73/140 (52%), Gaps = 8/140 (5%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK---RR 57 M ++ + GL+ V+ C YA+ ++ P ++++ + + A R P + RR Sbjct: 1 MTSFDALIVAGLLAVTASCLAYAVVVPLL-PSEARAAKRQQAI-AGRRSPMERVQAVNRR 58 Query: 58 KELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSS 117 +++ ++++++E + S++ I+ +GL I+K +Y+ S V+ + V+ L +S Sbjct: 59 EQVAKSLKELEAKERKA---RPSLELRITQAGLSITKSQFYVASGVLAGVSLVMGLVMSG 115 Query: 118 SFFTFLCVSVSSALVFPRFF 137 S T + ++ ++ L P++ Sbjct: 116 SPLTAIALAFAAGLGLPQWL 135 >gi|153008063|ref|YP_001369278.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] gi|151559951|gb|ABS13449.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] Length = 337 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 11/137 (8%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQ---------DNAKVVRADRVIPTANTKRRKELRE 62 L V+ YA+FY + D ++ + R++R KRRK+L++ Sbjct: 14 LAVVACAALFYALFYEKLGKKDHAARRFETVRNSGSERAITRSERDRNADIQKRRKQLQD 73 Query: 63 AIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 I+ +E K + N K + L++ +GL ++ Q +YI S V F+ ++L + Sbjct: 74 NIKDLEARQKQREKNQKYPPLRILLAQAGLSLTLQKFYIYSGVAAFLATFIALIFGAPLL 133 Query: 121 TFLCVSVSSALVFPRFF 137 ++++ PR+F Sbjct: 134 FLPGIAIAGFFGLPRWF 150 >gi|328545275|ref|YP_004305384.1| Bacterial type II secretion system protein F domain [polymorphum gilvum SL003B-26A1] gi|326415017|gb|ADZ72080.1| Bacterial type II secretion system protein F domain [Polymorphum gilvum SL003B-26A1] Length = 339 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR-----ADRVIPTANTKRRKELREAIQK 66 L S+ +YA+F V++ + Q ++ +DR KRRK +++ +++ Sbjct: 20 LAAFSIGGVIYALFEPVLSGSKRREQRLGQIAARPQAASDRRPVRDAEKRRKSVQDQLKE 79 Query: 67 IELNHKA--KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLC 124 E KA K N+ ++ + + +GL ++H+ I S V G + +L L+ S L Sbjct: 80 FEEKQKARQKRANSLTLTNRLEQAGLDWERKHFIIFSIVSGLVFLILGFLLTRSPILTLA 139 Query: 125 VSVSSALVFPRFF 137 ++ L FPR++ Sbjct: 140 IAFVGGLGFPRWY 152 >gi|163757631|ref|ZP_02164720.1| hypothetical protein HPDFL43_19512 [Hoeflea phototrophica DFL-43] gi|162285133|gb|EDQ35415.1| hypothetical protein HPDFL43_19512 [Hoeflea phototrophica DFL-43] Length = 336 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 16/141 (11%) Query: 9 LVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA---DRVIPTAN-------TKRRK 58 ++GL +S Y + Y+ I GD K+++ K V+A DR +A KRRK Sbjct: 11 IIGLAALSAGALGYGVLYSRIE-GDRKAENRVKRVKAAETDRSKASAARDRLAEANKRRK 69 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSL---ISCSGLPISKQHYYIGSCVIGFICGVLSLTL 115 ++++++ L+ K K + K+ L I +GLP S +Y+ S V+G + G++ Sbjct: 70 SVQDSLK--TLDEKNKENDKKTSPPLKDKIGQAGLPFSLGQFYMISLVLGLVAGLVGFVA 127 Query: 116 SSSFFTFLCVSVSSALVFPRF 136 S +++ PR+ Sbjct: 128 YGSPLVAAGIAIIFGAGVPRW 148 >gi|218461009|ref|ZP_03501100.1| probable pilus assembly protein [Rhizobium etli Kim 5] gi|218662450|ref|ZP_03518380.1| probable pilus assembly protein [Rhizobium etli IE4771] Length = 335 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAEVDRVKVKAARDRV--QELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLLQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S + + +++ + +S+ + ++V + L PR+ Sbjct: 99 AGLPISVGKFYLISAIFASVLLIVAFIVGASWMVMIGIAVVAGLGLPRW 147 >gi|116249985|ref|YP_765823.1| pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254633|emb|CAK05707.1| putative pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] Length = 335 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAESDRVKVKAARDRV--QELSKRRKSVQDNLKDLEKRQHEKTKKTVSMKSRLVQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL I+ +Y+ S V + +++L + +S + ++V + L PR+ Sbjct: 99 AGLTITAAKFYLISAVFASVLLLIALVVGASLMVMIGIAVVAGLGLPRW 147 >gi|190889885|ref|YP_001976427.1| pilus assembly protein [Rhizobium etli CIAT 652] gi|190695164|gb|ACE89249.1| probable pilus assembly protein [Rhizobium etli CIAT 652] gi|327194690|gb|EGE61536.1| putative pilus assembly protein [Rhizobium etli CNPAF512] Length = 335 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAEVDRVKVKAARDRV--QELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLLQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S V + ++ + +S+ + ++V + L PR+ Sbjct: 99 AGLPISVGKFYLISAVFASVLLFVAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|218516696|ref|ZP_03513536.1| probable pilus assembly protein [Rhizobium etli 8C-3] Length = 335 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAEVDRVKVKAARDRV--QELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLLQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S V + ++ + +S+ + ++V + L PR+ Sbjct: 99 AGLPISVGKFYLISAVFASVLLFVAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|13474664|ref|NP_106233.1| hypothetical protein mlr5603 [Mesorhizobium loti MAFF303099] gi|14025419|dbj|BAB52019.1| mlr5603 [Mesorhizobium loti MAFF303099] Length = 337 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 18 FCFLYAIFYNVINPGD-----SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHK 72 + FL+ N G ++ + +V+A R T KRRK +++++++++ K Sbjct: 24 YAFLFTQISNEKQAGKRLETIKTAETDRSIVKATRDRATDAAKRRKSVQDSLKELDEKQK 83 Query: 73 AKIGNTKS--IDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSA 130 K K + + + +G+ +S + +YI S + G V++ + + V ++ A Sbjct: 84 TKDSAIKKPPLKAQLRQAGMKVSIERFYIYSAICGLALTVVAFVVGAPMLVLPGVLLAGA 143 Query: 131 LVFPRFF 137 L PR+F Sbjct: 144 LGLPRWF 150 >gi|241207161|ref|YP_002978257.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861051|gb|ACS58718.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 335 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ + + Sbjct: 41 INRVKSAESDRVKVKAARDRV--QELSKRRKSVQDNLKDLEKRQHEKTKKTVSMKARLVQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL I+ +Y+ S V + +++L + +S+ + ++V + L PR+ Sbjct: 99 AGLTITAAKFYLISAVFASMLLLVALVVGASWMVMVGIAVVAGLGLPRW 147 >gi|218672463|ref|ZP_03522132.1| probable pilus assembly protein [Rhizobium etli GR56] Length = 168 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D KV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAEVDRVKVKAARDRVQEL--SKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLLQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S + + + + +S+ + ++V + L PR+ Sbjct: 99 AGLPISVGKFYLISAIFASVLLFGAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|260461945|ref|ZP_05810190.1| type II secretion system protein [Mesorhizobium opportunistum WSM2075] gi|259032192|gb|EEW33458.1| type II secretion system protein [Mesorhizobium opportunistum WSM2075] Length = 337 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 36 SQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKS--IDSLISCSGLPIS 93 ++ + VV+A R T KRRK +++++++++ K+K K + + + +G+ + Sbjct: 47 AETDRSVVKATRDRATDAAKRRKSVQDSLKELDEKQKSKDSAIKKPPLKAQLRQAGMKVP 106 Query: 94 KQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 + +YI S + G V++ + V ++ AL PR+F Sbjct: 107 IERFYIYSAICGIALTVIAFVAGAPLIVLPGVLLAGALGLPRWF 150 >gi|86355868|ref|YP_467760.1| pilus assembly protein [Rhizobium etli CFN 42] gi|86279970|gb|ABC89033.1| probable pilus assembly protein [Rhizobium etli CFN 42] Length = 335 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Query: 29 INPGDSKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 IN S D AKV A DRV +KRRK +++ ++ +E K T S+ S + Sbjct: 41 INRVKSAEVDRAKVKAARDRV--QEMSKRRKSVQDNLKDLEKRQNEKTKKTLSMKSRLVQ 98 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL ++ +Y+ S + + ++ + +S+ + ++ + L PR+ Sbjct: 99 AGLTVTLTQFYLFSAIFASVLLFMAFIIGASWLVMIGIAFVAGLGLPRW 147 >gi|154250693|ref|YP_001411517.1| type II secretion system protein [Parvibaculum lavamentivorans DS-1] gi|154154643|gb|ABS61860.1| type II secretion system protein [Parvibaculum lavamentivorans DS-1] Length = 328 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 19/116 (16%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQD---------NAKVVRADRVIPTA 52 D ++ + G+ ++ C + AI + + G+S+SQ NA++V D + + Sbjct: 1 MDQSTLMIAGIAVLAALC-IGAIGFLFVG-GESRSQKRVARVTRAGNARLVAVDGEVDNS 58 Query: 53 NTKRRKELREAIQKIE---LNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIG 105 KRRK+++E ++ +E HK ++ S+++ I +GL ++ +++YI S V G Sbjct: 59 E-KRRKQMQETLKGLEEKQQEHKKRV----SLNTRIERAGLEMTTRNFYIASIVTG 109 >gi|15887569|ref|NP_353250.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] gi|15155106|gb|AAK86035.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 334 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 17/143 (11%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA------------DRVIPTANTK 55 L L+ +S YA + I + K+ K V+A DRV +K Sbjct: 7 LLAVLVAISAGALAYAFLFQQIEV-EKKTTSRFKRVQAAETDHTNIKAARDRV--QELSK 63 Query: 56 RRKELREAIQKIE--LNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSL 113 RRK ++++++ +E N KAK S+ + +GL IS + +++ S +SL Sbjct: 64 RRKSMQDSLRDMEKKQNEKAKKAKNVSLRDKLVQAGLTISVRQFHLLSAGAAACAAFISL 123 Query: 114 TLSSSFFTFLCVSVSSALVFPRF 136 S T L ++V +AL PR+ Sbjct: 124 IYGLSLLTALPIAVVAALGLPRW 146 >gi|304320651|ref|YP_003854294.1| hypothetical protein PB2503_05392 [Parvularcula bermudensis HTCC2503] gi|303299553|gb|ADM09152.1| hypothetical protein PB2503_05392 [Parvularcula bermudensis HTCC2503] Length = 330 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 9/143 (6%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIF-YNVINPGDSKSQD---NAKVVRADRVIPTANTKRR 57 D NS +G+ V++ +A+ ++ + + Q NAK + RR Sbjct: 3 LDQNSLIALGIGLVAIVGLAFALLGFDGGGATNKRVQSLSGNAKQAKRKTSAKEQTRDRR 62 Query: 58 KELREAIQKIELNHKAKIGNTK---SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLT 114 K + ++++KIE K K N K S+D LI +G S + ++ S ++ + + Sbjct: 63 KTISDSLKKIE--DKQKEANQKKKVSLDKLIEQAGFDFSVRDFWTASAIVAVVMIGIGYV 120 Query: 115 LSSSFFTFLCVSVSSALVFPRFF 137 + L + + L PR+F Sbjct: 121 SGQNALVILAMGIVGGLGIPRWF 143 >gi|209551763|ref|YP_002283680.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537519|gb|ACI57454.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 335 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%) Query: 34 SKSQDNAKVVRA-DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPI 92 S D KV A DRV +KRRK +++ ++ +E K T ++ S + +GL I Sbjct: 46 SAESDRVKVKAARDRV--QEMSKRRKSVQDNLKDLEKRQHEKTKKTLTMKSRLVQAGLTI 103 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 + +YI S + + +++ + S + ++V + L PR+ Sbjct: 104 TVGKFYIISAIFACVLLLMAFLIGVSLMVIIGIAVVAGLGLPRW 147 >gi|222147178|ref|YP_002548135.1| component of type IV pilus [Agrobacterium vitis S4] gi|221734168|gb|ACM35131.1| component of type IV pilus [Agrobacterium vitis S4] Length = 334 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Query: 33 DSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIE--LNHKAKIGNTKSIDSLISCSGL 90 ++++ K V DRV +KRRK +++ +++IE N K K +++S+ + +GL Sbjct: 43 NAEADTAKKQVARDRV--QELSKRRKSVQDTLKEIERKQNEKNKKISSQSLKQRLGQTGL 100 Query: 91 PISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +S + I S +G + L L S F L ++ ++ PR+ Sbjct: 101 DVSLIQFSIASTTLGLVFFCLCFVLGMSLFVSLGIAFTAGAGLPRW 146 >gi|239833233|ref|ZP_04681562.1| type II secretion system protein [Ochrobactrum intermedium LMG 3301] gi|239825500|gb|EEQ97068.1| type II secretion system protein [Ochrobactrum intermedium LMG 3301] Length = 336 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 11/139 (7%) Query: 10 VGLITVSVFCFLYAIFYNVINPGD---------SKSQDNAKVVRADRVIPTANTKRRKEL 60 V L ++ YA+FY + D S + R++R KRRK+L Sbjct: 11 VVLAVIACAALFYALFYEKLGKKDHAARRFETVRNSGSERAITRSERDRNADIQKRRKQL 70 Query: 61 REAIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ I+ +E K + N K + L++ +GL ++ Q +Y+ S F ++L + Sbjct: 71 QDNIKDLEARQKQREKNQKYPPLRILLTQAGLTLTLQKFYLYSGAAAFFATFVALLFGAP 130 Query: 119 FFTFLCVSVSSALVFPRFF 137 ++++ PR+F Sbjct: 131 LLFLPGIAIAGFFGLPRWF 149 >gi|227823975|ref|YP_002827948.1| putative type II/IV secretion system protein TadB, Flp pilus assembly protein TadB [Sinorhizobium fredii NGR234] gi|227342977|gb|ACP27195.1| putative type II/IV secretion system protein TadB, Flp pilus assembly protein TadB [Sinorhizobium fredii NGR234] Length = 336 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 16/129 (12%) Query: 22 YAIFYNVINPGDSKSQ-----------DNAKVVRA-DRVIPTANTKRRKELREAIQKIEL 69 Y + Y+ I D K++ D AK+ A DRV +KRRK L+++++++E Sbjct: 24 YGVLYSRIE-NDKKAEGRLRRVSAAETDRAKIKAARDRV--NEMSKRRKSLQDSLKELEK 80 Query: 70 NHKAKIGNTK-SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVS 128 + K N S+ + + L IS +Y+ S + G ++ L + + V++ Sbjct: 81 KQQEKSANAAPSMKKRLVQANLSISPAQFYVFSVIFGLFALIVVLIAGAGLWIAGGVALI 140 Query: 129 SALVFPRFF 137 +A PR+ Sbjct: 141 TAAGLPRWL 149 >gi|296444391|ref|ZP_06886356.1| Type II secretion system F domain protein [Methylosinus trichosporium OB3b] gi|296258038|gb|EFH05100.1| Type II secretion system F domain protein [Methylosinus trichosporium OB3b] Length = 322 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD----RVIPTAN-TKR 56 D S L ++V +YA+ Y ++ GD K+Q + A R +A+ KR Sbjct: 1 MDRQSLIGATLAALAVGGVMYAVVYPYLS-GDFKAQKRTAALMASGDRRREGRSADPAKR 59 Query: 57 RKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 RK ++++++ IE K +++ I+ +GL +S+ + IG+ V G + S L+ Sbjct: 60 RKMIQDSLKDIETKAK-----QITLEQRIAQAGLAVSRSLFMIGAGVAGLFAALFSFILN 114 Query: 117 S 117 Sbjct: 115 Q 115 >gi|110636325|ref|YP_676533.1| type II secretion system protein [Mesorhizobium sp. BNC1] gi|110287309|gb|ABG65368.1| type II secretion system protein [Chelativorans sp. BNC1] Length = 337 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Query: 35 KSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHK--AKIGNTKSIDSLISCSGLPI 92 ++Q VVRA R KRR+ ++E+++ IE K + + I +GL + Sbjct: 46 RAQIEGNVVRAARDRAAEIAKRRRSIQESLKDIETRQKDQDRFLKRPPLKIQIRQAGLEM 105 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S + +YI S V+G + +++ + V+ PR+ Sbjct: 106 SMERFYILSAVVGLLFVIVTFIAGAPLLAVAGAMVAGFFGAPRW 149 >gi|302843015|ref|XP_002953050.1| hypothetical protein VOLCADRAFT_105763 [Volvox carteri f. nagariensis] gi|300261761|gb|EFJ45972.1| hypothetical protein VOLCADRAFT_105763 [Volvox carteri f. nagariensis] Length = 135 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 82 DSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 D L++C + KQ I + ++G ICGVL LT F TFL + + S +VF R Sbjct: 37 DELLTC--VHWQKQ---ITAAILGLICGVLPLTGLEGFVTFLALQLVSTMVFYRM 86 >gi|307320430|ref|ZP_07599847.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] gi|306893996|gb|EFN24765.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] Length = 336 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPI 92 S S+ + ++A R +KRRK ++++++++E + K NT S+ + +GL I Sbjct: 45 SASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSI 104 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S +Y+ S + G ++ L + V++ A PR+ Sbjct: 105 SLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRW 148 >gi|15963898|ref|NP_384251.1| hypothetical protein SMc02821 [Sinorhizobium meliloti 1021] gi|307315795|ref|ZP_07595309.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] gi|15073073|emb|CAC41532.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306898563|gb|EFN29236.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] Length = 336 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPI 92 S S+ + ++A R +KRRK ++++++++E + K NT S+ + +GL I Sbjct: 45 SASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSI 104 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S +Y+ S + G ++ L + V++ A PR+ Sbjct: 105 SLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRW 148 >gi|293342807|ref|XP_002725333.1| PREDICTED: olfactory receptor Olr1657-like [Rattus norvegicus] Length = 317 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAK------VVRADRVIPTANTKRRKELREAIQ 65 LI VS+F I Y + P +S SQD K + V P T R K+++EAI+ Sbjct: 245 LIVVSLF--YGTIIYMYLQPANSYSQDQGKFLTLFYTIVTPSVNPLIYTLRNKDIKEAIK 302 Query: 66 KIELNHKAKIGN 77 K+ L +K G Sbjct: 303 KVILKAVSKKGQ 314 >gi|325291655|ref|YP_004277519.1| components of type IV pilus [Agrobacterium sp. H13-3] gi|325059508|gb|ADY63199.1| components of type IV pilus [Agrobacterium sp. H13-3] Length = 334 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 17/149 (11%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA------------DRVI 49 D L L+ +S YA + I + K+ K V+A DRV Sbjct: 1 MDPTILLLAALVAISAGALAYAFLFQQIEV-EKKTTSRVKRVKAAETDHANIKAARDRVQ 59 Query: 50 PTANTKRRKELREAIQKIE--LNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFI 107 KRRK ++++++++E + KAK + + +GL +S + +++ S Sbjct: 60 ELG--KRRKSMQDSLREMEKKQSEKAKKAKNVGLREKLVQAGLQLSVRQFHLLSAGAAAF 117 Query: 108 CGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 V++L S L + AL PR+ Sbjct: 118 SVVIALLYGLSLLIALLIGAVVALGLPRW 146 >gi|194040001|ref|XP_001928084.1| PREDICTED: olfactory receptor 2W1-like [Sus scrofa] Length = 361 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 19/99 (19%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA--DRVIPTAN----TKRRKELREAIQ 65 LI VS+F + Y I PG+S +QD K++ V P N T R KE + A++ Sbjct: 242 LIVVSLF--YGTVIYMYIQPGNSPNQDEGKLLSVFYSTVTPAMNPLIYTLRNKEFKGAVK 299 Query: 66 KIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVI 104 + L K K+ + DS S Q + I CV+ Sbjct: 300 R--LIRKKKVLQKQYTDS---------SSQQFSIWKCVL 327 >gi|301783425|ref|XP_002927141.1| PREDICTED: putative olfactory receptor 2W6-like [Ailuropoda melanoleuca] Length = 312 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVI--PTAN----TKRRKELREAIQ 65 LI VSVF +I Y + P D+ SQD K + I P+ N T R K+++EA++ Sbjct: 245 LIVVSVF--YGSIIYMYLQPADAYSQDQGKFLTLSYTIVTPSVNPLIYTLRNKDVKEAVR 302 Query: 66 KI 67 K+ Sbjct: 303 KV 304 >gi|281345992|gb|EFB21576.1| hypothetical protein PANDA_016828 [Ailuropoda melanoleuca] Length = 307 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVI--PTAN----TKRRKELREAIQ 65 LI VSVF +I Y + P D+ SQD K + I P+ N T R K+++EA++ Sbjct: 245 LIVVSVF--YGSIIYMYLQPADAYSQDQGKFLTLSYTIVTPSVNPLIYTLRNKDVKEAVR 302 Query: 66 KI 67 K+ Sbjct: 303 KV 304 >gi|304392380|ref|ZP_07374321.1| type II secretion system protein [Ahrensia sp. R2A130] gi|303295484|gb|EFL89843.1| type II secretion system protein [Ahrensia sp. R2A130] Length = 332 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 9/94 (9%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTA------NTKRRKELREAIQK--IELNHKA 73 YA+ YN I D KS++ + ++ D+ + K+R++ REA K + K Sbjct: 22 YALLYNSI-ASDKKSKERMQRLQMDKKTKMKVESRKMDEKQRRKSREAALKNVDDQKSKG 80 Query: 74 KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFI 107 K ++ ++ +G IS +Y+ S VIG + Sbjct: 81 KTAGKETFREILEQAGFTISLGKFYVVSAVIGIL 114 >gi|311259889|ref|XP_003128265.1| PREDICTED: putative olfactory receptor 2W6-like [Sus scrofa] gi|311259899|ref|XP_003128264.1| PREDICTED: putative olfactory receptor 2W6-like [Sus scrofa] Length = 309 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%) Query: 17 VFCFLYAIFYNVINPGDSKSQDNAKVVRA--DRVIPTAN----TKRRKELREAIQKI 67 VF F +I Y + PG+S SQD K + + V P N T R KE++ A++K+ Sbjct: 248 VFLFYGSIIYMYMQPGNSSSQDQGKFLTLFYNLVTPMLNPLIYTLRNKEVKGALKKV 304 >gi|114573663|ref|XP_001141172.1| PREDICTED: olfactory receptor 2G3-like [Pan troglodytes] Length = 309 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 17 VFCFLYAIFYNVINPGDSKSQDNAKVVRA--DRVIPTAN----TKRRKELREAIQKI 67 V F I Y + P DS +QD K + V PT N T R K+++EA++K+ Sbjct: 248 VIIFYGTIIYRYLQPSDSYAQDQGKFISLFYTMVTPTLNPIIYTLRNKDMKEALRKL 304 >gi|222084473|ref|YP_002543002.1| pilus assembly protein [Agrobacterium radiobacter K84] gi|221721921|gb|ACM25077.1| pilus assembly protein [Agrobacterium radiobacter K84] Length = 335 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 9/103 (8%) Query: 38 DNAKV-VRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL---ISCSGLPIS 93 D KV V DRV +KRRK +++ ++ +E K ++ NTK SL + +GL ++ Sbjct: 50 DRTKVKVARDRV--QEMSKRRKSVQDTLKDLE---KRQVENTKKKQSLKARLVQAGLSLT 104 Query: 94 KQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +Y+ S + G V++ + + ++A PR+ Sbjct: 105 PARFYVFSVLFGLFVMVVAFLFGAPLAVIAGLPFAAAFGLPRW 147 >gi|297743354|emb|CBI36221.3| unnamed protein product [Vitis vinifera] Length = 1362 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 21/80 (26%) Query: 7 WFLVGLITVSVFCFLYAIFY----NVINPGDS------KSQDNAKVVRADRVIPTANTKR 56 W+ +G + F F++ IFY N +NP + + DNAK TA T+R Sbjct: 686 WYWIGAGALLGFIFVFNIFYTLCLNYLNPFEKPQAVIIEESDNAK---------TATTER 736 Query: 57 RKELREAIQKIELNHKAKIG 76 +++ EAI E NH K G Sbjct: 737 GEQMVEAIA--EANHNKKKG 754 >gi|70954100|ref|XP_746113.1| uga suppressor tRNA-associated antigenic protein, [Plasmodium chabaudi chabaudi] gi|56526630|emb|CAH78766.1| uga suppressor tRNA-associated antigenic protein, putative [Plasmodium chabaudi chabaudi] Length = 551 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Query: 31 PGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGL 90 PGD + + +VVR +++I N KR K+ +K IGN D SCS Sbjct: 435 PGDDDLKLDEEVVRVNKLIGFENLKR------MYYKLNAKNKIVIGNKIFHDFGSSCSNY 488 Query: 91 PISKQHYYIGSCVIG 105 P S Y SCVIG Sbjct: 489 PYS---YIAFSCVIG 500 Searching..................................................done Results from round 2 >gi|254780723|ref|YP_003065136.1| hypothetical protein CLIBASIA_03050 [Candidatus Liberibacter asiaticus str. psy62] gi|254040400|gb|ACT57196.1| hypothetical protein CLIBASIA_03050 [Candidatus Liberibacter asiaticus str. psy62] Length = 137 Score = 176 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL Sbjct: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 Query: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF Sbjct: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 Query: 121 TFLCVSVSSALVFPRFF 137 TFLCVSVSSALVFPRFF Sbjct: 121 TFLCVSVSSALVFPRFF 137 >gi|153008063|ref|YP_001369278.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] gi|151559951|gb|ABS13449.1| type II secretion system protein [Ochrobactrum anthropi ATCC 49188] Length = 337 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQD---------NAKVVRADRVIPTANTKRRK 58 + L V+ YA+FY + D ++ + R++R KRRK Sbjct: 10 MFIVLAVVACAALFYALFYEKLGKKDHAARRFETVRNSGSERAITRSERDRNADIQKRRK 69 Query: 59 ELREAIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 +L++ I+ +E K + N K + L++ +GL ++ Q +YI S V F+ ++L Sbjct: 70 QLQDNIKDLEARQKQREKNQKYPPLRILLAQAGLSLTLQKFYIYSGVAAFLATFIALIFG 129 Query: 117 SSFFTFLCVSVSSALVFPRFF 137 + ++++ PR+F Sbjct: 130 APLLFLPGIAIAGFFGLPRWF 150 >gi|328545275|ref|YP_004305384.1| Bacterial type II secretion system protein F domain [polymorphum gilvum SL003B-26A1] gi|326415017|gb|ADZ72080.1| Bacterial type II secretion system protein F domain [Polymorphum gilvum SL003B-26A1] Length = 339 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 15/152 (9%) Query: 1 MFDVNSWF--------LVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR-----ADR 47 M +++ + L S+ +YA+F V++ + Q ++ +DR Sbjct: 1 MTSLDALLTPELTTIAVALLAAFSIGGVIYALFEPVLSGSKRREQRLGQIAARPQAASDR 60 Query: 48 VIPTANTKRRKELREAIQKIELNHK--AKIGNTKSIDSLISCSGLPISKQHYYIGSCVIG 105 KRRK +++ +++ E K K N+ ++ + + +GL ++H+ I S V G Sbjct: 61 RPVRDAEKRRKSVQDQLKEFEEKQKARQKRANSLTLTNRLEQAGLDWERKHFIIFSIVSG 120 Query: 106 FICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 + +L L+ S L ++ L FPR++ Sbjct: 121 LVFLILGFLLTRSPILTLAIAFVGGLGFPRWY 152 >gi|315121887|ref|YP_004062376.1| pilus assembly protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495289|gb|ADR51888.1| pilus assembly protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 328 Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats. Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 3/137 (2%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVIN-PGDSKSQDNAKVVRADR--VIPTANTKRRK 58 D+NS+ LVGLI++SVF LY + + S+S+D KV++ + IP+A KRRK Sbjct: 3 LDINSFLLVGLISISVFFLLYFLLFKTTGLESSSESRDPKKVIKDKKNDTIPSAAVKRRK 62 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 LR+A+ KIEL+HK K GNTKS+ SLIS SG+P SK+H+YI SCV+G + G++SL L SS Sbjct: 63 VLRDAMDKIELSHKEKFGNTKSLSSLISYSGIPFSKEHFYIFSCVMGLVFGIISLALFSS 122 Query: 119 FFTFLCVSVSSALVFPR 135 FF LCV +SSALV PR Sbjct: 123 FFVSLCVCLSSALVVPR 139 >gi|218461009|ref|ZP_03501100.1| probable pilus assembly protein [Rhizobium etli Kim 5] gi|218662450|ref|ZP_03518380.1| probable pilus assembly protein [Rhizobium etli IE4771] Length = 335 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAEVDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLL 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S + + +++ + +S+ + ++V + L PR+ Sbjct: 98 QAGLPISVGKFYLISAIFASVLLIVAFIVGASWMVMIGIAVVAGLGLPRW 147 >gi|190889885|ref|YP_001976427.1| pilus assembly protein [Rhizobium etli CIAT 652] gi|190695164|gb|ACE89249.1| probable pilus assembly protein [Rhizobium etli CIAT 652] gi|327194690|gb|EGE61536.1| putative pilus assembly protein [Rhizobium etli CNPAF512] Length = 335 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAEVDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLL 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S V + ++ + +S+ + ++V + L PR+ Sbjct: 98 QAGLPISVGKFYLISAVFASVLLFVAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|218516696|ref|ZP_03513536.1| probable pilus assembly protein [Rhizobium etli 8C-3] Length = 335 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAEVDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLL 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S V + ++ + +S+ + ++V + L PR+ Sbjct: 98 QAGLPISVGKFYLISAVFASVLLFVAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|13474664|ref|NP_106233.1| hypothetical protein mlr5603 [Mesorhizobium loti MAFF303099] gi|14025419|dbj|BAB52019.1| mlr5603 [Mesorhizobium loti MAFF303099] Length = 337 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 13/150 (8%) Query: 1 MFDVNSWFL--VGLITVSVFCFLYAIFYNVINPGD---------SKSQDNAKVVRADRVI 49 MF ++ L V L S YA + I+ ++ + +V+A R Sbjct: 1 MFGIDGTVLAFVVLAGFSAGAVAYAFLFTQISNEKQAGKRLETIKTAETDRSIVKATRDR 60 Query: 50 PTANTKRRKELREAIQKIELNHKAKIG--NTKSIDSLISCSGLPISKQHYYIGSCVIGFI 107 T KRRK +++++++++ K K + + + +G+ +S + +YI S + G Sbjct: 61 ATDAAKRRKSVQDSLKELDEKQKTKDSAIKKPPLKAQLRQAGMKVSIERFYIYSAICGLA 120 Query: 108 CGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 V++ + + V ++ AL PR+F Sbjct: 121 LTVVAFVVGAPMLVLPGVLLAGALGLPRWF 150 >gi|163757631|ref|ZP_02164720.1| hypothetical protein HPDFL43_19512 [Hoeflea phototrophica DFL-43] gi|162285133|gb|EDQ35415.1| hypothetical protein HPDFL43_19512 [Hoeflea phototrophica DFL-43] Length = 336 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 14/149 (9%) Query: 1 MFDVNSWF--LVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD----------RV 48 MF +++ ++GL +S Y + Y+ I GD K+++ K V+A R Sbjct: 1 MFGLDTVVVAIIGLAALSAGALGYGVLYSRIE-GDRKAENRVKRVKAAETDRSKASAARD 59 Query: 49 IPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPISKQHYYIGSCVIGFI 107 KRRK ++++++ ++ +K T + I +GLP S +Y+ S V+G + Sbjct: 60 RLAEANKRRKSVQDSLKTLDEKNKENDKKTSPPLKDKIGQAGLPFSLGQFYMISLVLGLV 119 Query: 108 CGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 G++ S +++ PR+ Sbjct: 120 AGLVGFVAYGSPLVAAGIAIIFGAGVPRW 148 >gi|239833233|ref|ZP_04681562.1| type II secretion system protein [Ochrobactrum intermedium LMG 3301] gi|239825500|gb|EEQ97068.1| type II secretion system protein [Ochrobactrum intermedium LMG 3301] Length = 336 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 11/141 (7%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQD---------NAKVVRADRVIPTANTKRRK 58 V L ++ YA+FY + D ++ + R++R KRRK Sbjct: 9 MFVVLAVIACAALFYALFYEKLGKKDHAARRFETVRNSGSERAITRSERDRNADIQKRRK 68 Query: 59 ELREAIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 +L++ I+ +E K + N K + L++ +GL ++ Q +Y+ S F ++L Sbjct: 69 QLQDNIKDLEARQKQREKNQKYPPLRILLTQAGLTLTLQKFYLYSGAAAFFATFVALLFG 128 Query: 117 SSFFTFLCVSVSSALVFPRFF 137 + ++++ PR+F Sbjct: 129 APLLFLPGIAIAGFFGLPRWF 149 >gi|170740617|ref|YP_001769272.1| type II secretion system protein [Methylobacterium sp. 4-46] gi|168194891|gb|ACA16838.1| type II secretion system protein [Methylobacterium sp. 4-46] Length = 322 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 73/140 (52%), Gaps = 8/140 (5%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK---RR 57 M ++ + GL+ V+ C YA+ ++ P ++++ + + A R P + RR Sbjct: 1 MTSFDALIVAGLLAVTASCLAYAVVVPLL-PSEARAAKRQQAI-AGRRSPMERVQAVNRR 58 Query: 58 KELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSS 117 +++ ++++++E + S++ I+ +GL I+K +Y+ S V+ + V+ L +S Sbjct: 59 EQVAKSLKELEAKERKA---RPSLELRITQAGLSITKSQFYVASGVLAGVSLVMGLVMSG 115 Query: 118 SFFTFLCVSVSSALVFPRFF 137 S T + ++ ++ L P++ Sbjct: 116 SPLTAIALAFAAGLGLPQWL 135 >gi|260461945|ref|ZP_05810190.1| type II secretion system protein [Mesorhizobium opportunistum WSM2075] gi|259032192|gb|EEW33458.1| type II secretion system protein [Mesorhizobium opportunistum WSM2075] Length = 337 Score = 124 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 13/150 (8%) Query: 1 MFDVNSWFL--VGLITVSVFCFLYAIFYNVINPGD---------SKSQDNAKVVRADRVI 49 MF ++ L V L S YA +N I+ ++ + VV+A R Sbjct: 1 MFGIDGTVLAFVVLAGFSAGAVAYAFLFNQISNERQTGKRLETIKAAETDRSVVKATRDR 60 Query: 50 PTANTKRRKELREAIQKIELNHKAKIG--NTKSIDSLISCSGLPISKQHYYIGSCVIGFI 107 T KRRK +++++++++ K+K + + + +G+ + + +YI S + G Sbjct: 61 ATDAAKRRKSVQDSLKELDEKQKSKDSAIKKPPLKAQLRQAGMKVPIERFYIYSAICGIA 120 Query: 108 CGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 V++ + V ++ AL PR+F Sbjct: 121 LTVIAFVAGAPLIVLPGVLLAGALGLPRWF 150 >gi|116249985|ref|YP_765823.1| pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254633|emb|CAK05707.1| putative pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] Length = 335 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAESDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTKKTVSMKSRLV 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL I+ +Y+ S V + +++L + +S + ++V + L PR+ Sbjct: 98 QAGLTITAAKFYLISAVFASVLLLIALVVGASLMVMIGIAVVAGLGLPRW 147 >gi|241207161|ref|YP_002978257.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861051|gb|ACS58718.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 335 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ + + Sbjct: 39 SRINRVKSAESDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTKKTVSMKARLV 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL I+ +Y+ S V + +++L + +S+ + ++V + L PR+ Sbjct: 98 QAGLTITAAKFYLISAVFASMLLLVALVVGASWMVMVGIAVVAGLGLPRW 147 >gi|86355868|ref|YP_467760.1| pilus assembly protein [Rhizobium etli CFN 42] gi|86279970|gb|ABC89033.1| probable pilus assembly protein [Rhizobium etli CFN 42] Length = 335 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D AKV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAEVDRAKVKAA-RDRVQEMSKRRKSVQDNLKDLEKRQNEKTKKTLSMKSRLV 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL ++ +Y+ S + + ++ + +S+ + ++ + L PR+ Sbjct: 98 QAGLTVTLTQFYLFSAIFASVLLFMAFIIGASWLVMIGIAFVAGLGLPRW 147 >gi|218672463|ref|ZP_03522132.1| probable pilus assembly protein [Rhizobium etli GR56] Length = 168 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + IN S D KV A R +KRRK +++ ++ +E K T S+ S + Sbjct: 39 SRINRVKSAEVDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTRKTLSMKSRLL 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GLPIS +Y+ S + + + + +S+ + ++V + L PR+ Sbjct: 98 QAGLPISVGKFYLISAIFASVLLFGAFVVGASWMVMIGIAVVAGLGLPRW 147 >gi|209551763|ref|YP_002283680.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537519|gb|ACI57454.1| type II secretion system protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 335 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + I+ S D KV A R +KRRK +++ ++ +E K T ++ S + Sbjct: 39 SRIDRVKSAESDRVKVKAA-RDRVQEMSKRRKSVQDNLKDLEKRQHEKTKKTLTMKSRLV 97 Query: 87 CSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 +GL I+ +YI S + + +++ + S + ++V + L PR+ Sbjct: 98 QAGLTITVGKFYIISAIFACVLLLMAFLIGVSLMVIIGIAVVAGLGLPRW 147 >gi|222084473|ref|YP_002543002.1| pilus assembly protein [Agrobacterium radiobacter K84] gi|221721921|gb|ACM25077.1| pilus assembly protein [Agrobacterium radiobacter K84] Length = 335 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 7/126 (5%) Query: 17 VFCFLYAIFY------NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELN 70 + LY+ + ++ + D KV A R +KRRK +++ ++ +E Sbjct: 23 CYGVLYSQIEAQKKTDSRVSRVKAAESDRTKVKVA-RDRVQEMSKRRKSVQDTLKDLEKR 81 Query: 71 HKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSA 130 +S+ + + +GL ++ +Y+ S + G V++ + + ++A Sbjct: 82 QVENTKKKQSLKARLVQAGLSLTPARFYVFSVLFGLFVMVVAFLFGAPLAVIAGLPFAAA 141 Query: 131 LVFPRF 136 PR+ Sbjct: 142 FGLPRW 147 >gi|307320430|ref|ZP_07599847.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] gi|306893996|gb|EFN24765.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] Length = 336 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPI 92 S S+ + ++A R +KRRK ++++++++E + K NT S+ + +GL I Sbjct: 45 SASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSI 104 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S +Y+ S + G ++ L + V++ A PR+ Sbjct: 105 SLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRW 148 >gi|15963898|ref|NP_384251.1| hypothetical protein SMc02821 [Sinorhizobium meliloti 1021] gi|307315795|ref|ZP_07595309.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] gi|15073073|emb|CAC41532.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306898563|gb|EFN29236.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] Length = 336 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPI 92 S S+ + ++A R +KRRK ++++++++E + K NT S+ + +GL I Sbjct: 45 SASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSI 104 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S +Y+ S + G ++ L + V++ A PR+ Sbjct: 105 SLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRW 148 >gi|110636325|ref|YP_676533.1| type II secretion system protein [Mesorhizobium sp. BNC1] gi|110287309|gb|ABG65368.1| type II secretion system protein [Chelativorans sp. BNC1] Length = 337 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 11/146 (7%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDS---------KSQDNAKVVRADRVIPTA 52 ++ V L S Y + +N I ++Q VVRA R Sbjct: 4 LSLSLLAFVVLAACSAGGLAYVLMFNTIASEKKVERRLETVKRAQIEGNVVRAARDRAAE 63 Query: 53 NTKRRKELREAIQKIELNHKAKIG--NTKSIDSLISCSGLPISKQHYYIGSCVIGFICGV 110 KRR+ ++E+++ IE K + + I +GL +S + +YI S V+G + + Sbjct: 64 IAKRRRSIQESLKDIETRQKDQDRFLKRPPLKIQIRQAGLEMSMERFYILSAVVGLLFVI 123 Query: 111 LSLTLSSSFFTFLCVSVSSALVFPRF 136 ++ + V+ PR+ Sbjct: 124 VTFIAGAPLLAVAGAMVAGFFGAPRW 149 >gi|319785604|ref|YP_004145080.1| type II secretion system F domain [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171492|gb|ADV15030.1| Type II secretion system F domain [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 337 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 13/150 (8%) Query: 1 MFDVNSWFL--VGLITVSVFCFLYAIFYNVINPGD---------SKSQDNAKVVRADRVI 49 MF ++ L V L S YA + I+ ++ + VV+A R Sbjct: 1 MFGIDGTVLAFVVLAGFSAGAVAYAFLFTRISNEKQVGKRLETIRTAETDRSVVKASRDR 60 Query: 50 PTANTKRRKELREAIQKIELNHKAKIG--NTKSIDSLISCSGLPISKQHYYIGSCVIGFI 107 KRRK +++++ +++ K K + + + +GL + + +YI S + G + Sbjct: 61 VAEAAKRRKSVQDSLNELDAKQKTKDSRVKKPPLKAQLRQAGLKTTIERFYIYSAICGIV 120 Query: 108 CGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 + + + V ++ L PR+F Sbjct: 121 LTMAAFVAGAPLIALPGVLLAGGLGLPRWF 150 >gi|227823975|ref|YP_002827948.1| putative type II/IV secretion system protein TadB, Flp pilus assembly protein TadB [Sinorhizobium fredii NGR234] gi|227342977|gb|ACP27195.1| putative type II/IV secretion system protein TadB, Flp pilus assembly protein TadB [Sinorhizobium fredii NGR234] Length = 336 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 10/126 (7%) Query: 22 YAIFYNVINPGD---------SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHK 72 Y + Y+ I S ++ + ++A R +KRRK L+++++++E + Sbjct: 24 YGVLYSRIENDKKAEGRLRRVSAAETDRAKIKAARDRVNEMSKRRKSLQDSLKELEKKQQ 83 Query: 73 AKIGNT-KSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSAL 131 K N S+ + + L IS +Y+ S + G ++ L + + V++ +A Sbjct: 84 EKSANAAPSMKKRLVQANLSISPAQFYVFSVIFGLFALIVVLIAGAGLWIAGGVALITAA 143 Query: 132 VFPRFF 137 PR+ Sbjct: 144 GLPRWL 149 >gi|254505024|ref|ZP_05117175.1| Bacterial type II secretion system protein F domain [Labrenzia alexandrii DFL-11] gi|222441095|gb|EEE47774.1| Bacterial type II secretion system protein F domain [Labrenzia alexandrii DFL-11] Length = 339 Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 7/136 (5%) Query: 9 LVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR-----ADRVIPTANTKRRKELREA 63 + L+ SV +Y +F ++ + + V R +R+K +++ Sbjct: 17 VAILVMFSVGGIIYGLFLPSLSGTKKRDARMSAVSARPQSETQRKTMRDTNRRKKSIQDQ 76 Query: 64 IQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFT 121 ++ E KAK K + I +GL +H + S V + V+SL S + Sbjct: 77 LKDFEERQKAKHEKQKNVPLKVKIEQAGLEWEMRHLVLFSVVSAILFFVISLIASGNLLI 136 Query: 122 FLCVSVSSALVFPRFF 137 + + FPR++ Sbjct: 137 AAAFTFVGGIGFPRWY 152 >gi|15887569|ref|NP_353250.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] gi|15155106|gb|AAK86035.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 334 Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 11/140 (7%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKV---------VRADRVIPTANTKRRK 58 L L+ +S YA + I + +V ++A R +KRRK Sbjct: 7 LLAVLVAISAGALAYAFLFQQIEVEKKTTSRFKRVQAAETDHTNIKAARDRVQELSKRRK 66 Query: 59 ELREAIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 ++++++ +E K K S+ + +GL IS + +++ S +SL Sbjct: 67 SMQDSLRDMEKKQNEKAKKAKNVSLRDKLVQAGLTISVRQFHLLSAGAAACAAFISLIYG 126 Query: 117 SSFFTFLCVSVSSALVFPRF 136 S T L ++V +AL PR+ Sbjct: 127 LSLLTALPIAVVAALGLPRW 146 >gi|307943149|ref|ZP_07658494.1| type II secretion system protein [Roseibium sp. TrichSKD4] gi|307773945|gb|EFO33161.1| type II secretion system protein [Roseibium sp. TrichSKD4] Length = 340 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%) Query: 3 DVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIP------TANTKR 56 D+ + ++GL+ +S+ L+A+ ++ +SQ + + D P KR Sbjct: 11 DMTALAVMGLVMLSIGGVLFALLQPAMSSDKRRSQRISTIKGVDGKTPGLAIRNRDADKR 70 Query: 57 RKELREAIQKIELN--HKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLT 114 RK +++ + ++E K + + S+ I +GL + + S V G + V+ Sbjct: 71 RKSVKDQLDQLEQRTQQKNAMRDKPSLRLRIEQAGLSWDVKRFIQISIVTGVLATVIFYF 130 Query: 115 LSSSFFTFLCVSVSSALVFPRFF 137 S + L + A PRF+ Sbjct: 131 FSGNVLIALLGGFAGAFGLPRFY 153 >gi|222147178|ref|YP_002548135.1| component of type IV pilus [Agrobacterium vitis S4] gi|221734168|gb|ACM35131.1| component of type IV pilus [Agrobacterium vitis S4] Length = 334 Score = 93.6 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 11/126 (8%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRAD---------RVIPTANTKRRKELREAIQKIELNHK 72 Y + ++ + + A+V A+ R +KRRK +++ +++IE Sbjct: 21 YVLLFSRVQADKKTATRLARVKNAEADTAKKQVARDRVQELSKRRKSVQDTLKEIERKQN 80 Query: 73 AKIGN--TKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSA 130 K ++S+ + +GL +S + I S +G + L L S F L ++ ++ Sbjct: 81 EKNKKISSQSLKQRLGQTGLDVSLIQFSIASTTLGLVFFCLCFVLGMSLFVSLGIAFTAG 140 Query: 131 LVFPRF 136 PR+ Sbjct: 141 AGLPRW 146 >gi|325291655|ref|YP_004277519.1| components of type IV pilus [Agrobacterium sp. H13-3] gi|325059508|gb|ADY63199.1| components of type IV pilus [Agrobacterium sp. H13-3] Length = 334 Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 11/141 (7%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---------RVIPTANTKRR 57 L L+ +S YA + I + +V A+ R KRR Sbjct: 6 LLLAALVAISAGALAYAFLFQQIEVEKKTTSRVKRVKAAETDHANIKAARDRVQELGKRR 65 Query: 58 KELREAIQKIELNHKAKIGNTKS--IDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTL 115 K ++++++++E K K+ + + +GL +S + +++ S V++L Sbjct: 66 KSMQDSLREMEKKQSEKAKKAKNVGLREKLVQAGLQLSVRQFHLLSAGAAAFSVVIALLY 125 Query: 116 SSSFFTFLCVSVSSALVFPRF 136 S L + AL PR+ Sbjct: 126 GLSLLIALLIGAVVALGLPRW 146 >gi|92116009|ref|YP_575738.1| type II secretion system protein [Nitrobacter hamburgensis X14] gi|91798903|gb|ABE61278.1| type II secretion system protein [Nitrobacter hamburgensis X14] Length = 324 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 61/139 (43%), Gaps = 5/139 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 ++ + + + +V + Y ++ + + R A R + A RR+ Sbjct: 1 MNLQTLAMAFMAATAVGGVAWVFLYPALSGEAKAEKRRSAFARTAPAVRQVDRAQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++IE + K + +++ I+ +GL SK+ + I S + G +C + + + Sbjct: 61 QIEGSLREIE--QRQKRDSKITLNDRIAQAGLSWSKEKFLIVSGIFGAVCFAVPMFSGAG 118 Query: 119 FFTFLCVSVSSALVFPRFF 137 + ++ ++ PR+ Sbjct: 119 PIAAVGLAFAAGFGLPRWL 137 >gi|299132290|ref|ZP_07025485.1| Type II secretion system F domain protein [Afipia sp. 1NLS2] gi|298592427|gb|EFI52627.1| Type II secretion system F domain protein [Afipia sp. 1NLS2] Length = 323 Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 62/138 (44%), Gaps = 6/138 (4%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 + + + + V++ + Y +++ + A R A R I RR+ Sbjct: 1 MKIQTLAIAFMSAVTLGGLAWVFLYPLLSGERQAEKRRASFSRTEAATRRIDRNQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ + ++ +E +AK +++ ++ +G+ S++ + IGS +G + + +++ Sbjct: 61 QVEDTLKDVE--DRAKQAKKVPLNTRLAQAGVSWSRRQFIIGSAALGLLVFFICFV-TAN 117 Query: 119 FFTFLCVSVSSALVFPRF 136 +++S+ L PR+ Sbjct: 118 LIATAALALSAGLGLPRW 135 >gi|150398545|ref|YP_001329012.1| type II secretion system protein [Sinorhizobium medicae WSM419] gi|150030060|gb|ABR62177.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 336 Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT-KSIDSLISCSGLPI 92 S ++ + ++A R +KRRK ++++++++E + K N+ S+ + + L I Sbjct: 45 SAAETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANSAPSMKKRLLQANLSI 104 Query: 93 SKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 S +Y+ S + G V+ + V +++A PR+ Sbjct: 105 SVAQFYLFSALFGLFTFVVVFLAGAGALIAAGVGLTAAAGLPRW 148 >gi|114705451|ref|ZP_01438359.1| probable pilus assembly protein [Fulvimarina pelagi HTCC2506] gi|114540236|gb|EAU43356.1| probable pilus assembly protein [Fulvimarina pelagi HTCC2506] Length = 335 Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 11/148 (7%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---------RVIPT 51 M V L T+S C YA + + R + + Sbjct: 1 MTPFGMMLFVLLSTISAGCLAYAFMQPKLAASKRVAARKTTYSRDEASRTRVIEAKERMQ 60 Query: 52 ANTKRRKELREAIQKIELNHKAKIG--NTKSIDSLISCSGLPISKQHYYIGSCVIGFICG 109 KRR+ L+ ++ +E K + G ++ I +GL I+ + + + S + Sbjct: 61 EQAKRRRALQNNLKDLEDRAKERGGHSAKPTLQQRIDQAGLKITAKKFRLISAGLAAAAF 120 Query: 110 VLSLTLSSSFFTFLCVSVSSALVFPRFF 137 +L+L L ++V + L PR F Sbjct: 121 LLTLVFGLPILATLGIAVVAGLGLPRAF 148 >gi|90419768|ref|ZP_01227677.1| putative Flp pilus assembly protein TadB, type II/IV secretion system [Aurantimonas manganoxydans SI85-9A1] gi|90335809|gb|EAS49557.1| putative Flp pilus assembly protein TadB, type II/IV secretion system [Aurantimonas manganoxydans SI85-9A1] Length = 335 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 46/106 (43%), Gaps = 2/106 (1%) Query: 34 SKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT--KSIDSLISCSGLP 91 ++ + ++ R KRRK ++ +++++E K + +T ++ + +G Sbjct: 43 TRDDTERRSLKVARDRLKEQDKRRKTIQSSLKELESRQKERDKHTGKLTLQRQLEQAGWT 102 Query: 92 ISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 +S + + + S V+G + ++ + + V L PRF Sbjct: 103 MSVKQFVLLSIVMGVVSLFVAAIFGAPLLLLIGAVVVGGLGLPRFL 148 >gi|86748903|ref|YP_485399.1| type II secretion system protein [Rhodopseudomonas palustris HaA2] gi|86571931|gb|ABD06488.1| type II secretion system protein [Rhodopseudomonas palustris HaA2] Length = 324 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 58/138 (42%), Gaps = 5/138 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 ++ S L L VSV + Y +++ Q V R A R I + RR+ Sbjct: 1 MEMQSLALGFLAAVSVGGLAWVFIYPLLSGEKQAEQRRTSVARTTPAVRQIEKSQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++IE + + S+ + ++ +GL + + S +G + ++ L Sbjct: 61 QVEGSLREIEARSQKQKN--VSLGTKLTQAGLDWTPNKFIGVSAGLGTVAFATTMILGGG 118 Query: 119 FFTFLCVSVSSALVFPRF 136 + ++ ++ PR+ Sbjct: 119 LLAAVGLAFAAGFGLPRW 136 >gi|209886534|ref|YP_002290391.1| type II secretion system protein [Oligotropha carboxidovorans OM5] gi|209874730|gb|ACI94526.1| type II secretion system protein [Oligotropha carboxidovorans OM5] Length = 325 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 62/139 (44%), Gaps = 6/139 (4%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR----ADRVIPTANTKRR 57 ++ + + + V++ + Y ++ + A + R A RV RR Sbjct: 1 MNLQTLAIAFMSAVTLGGLAWVFLYPALSGERQAEKRRASLARPENIARRVERNPQRSRR 60 Query: 58 KELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSS 117 +++ + ++ +E ++AK ++ + +G+ +K+ + IGS V+G +L + + Sbjct: 61 EQVEDTLKDVE--NRAKQAKKVPLNIRLEQAGVNWTKRQFMIGSAVLGIATFLLFYIVDA 118 Query: 118 SFFTFLCVSVSSALVFPRF 136 +F + + ++ PR+ Sbjct: 119 NFLATIAFAGAAGFGLPRW 137 >gi|304320651|ref|YP_003854294.1| hypothetical protein PB2503_05392 [Parvularcula bermudensis HTCC2503] gi|303299553|gb|ADM09152.1| hypothetical protein PB2503_05392 [Parvularcula bermudensis HTCC2503] Length = 330 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 61/141 (43%), Gaps = 5/141 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIF-YNVINPGDSKSQDNAKVVRADRVIPTANTK---RR 57 D NS +G+ V++ +A+ ++ + + Q + + + +A + RR Sbjct: 3 LDQNSLIALGIGLVAIVGLAFALLGFDGGGATNKRVQSLSGNAKQAKRKTSAKEQTRDRR 62 Query: 58 KELREAIQKIELNHKAKIGNTK-SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 K + ++++KIE K K S+D LI +G S + ++ S ++ + + Sbjct: 63 KTISDSLKKIEDKQKEANQKKKVSLDKLIEQAGFDFSVRDFWTASAIVAVVMIGIGYVSG 122 Query: 117 SSFFTFLCVSVSSALVFPRFF 137 + L + + L PR+F Sbjct: 123 QNALVILAMGIVGGLGIPRWF 143 >gi|163851907|ref|YP_001639950.1| type II secretion system protein [Methylobacterium extorquens PA1] gi|163663512|gb|ABY30879.1| type II secretion system protein [Methylobacterium extorquens PA1] Length = 323 Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPT--ANTKRRK 58 M +N+ VGL+ V+ Y ++ Q + + V+ A RR+ Sbjct: 1 MSALNAPLTVGLVAVAAGSLAYVFLMPALSGERRAEQRRKALGQPQAVLAERGAAASRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++++E K +++ ++ +GL S+Q Y + S + + + + +S + Sbjct: 61 QVAKSLKELEAK---KDKTKVTLELRLARAGLDWSRQKYRVVSAITAVVLALAAFLVSHN 117 Query: 119 FFTFLCVSVSSALVFPRFF 137 P ++ Sbjct: 118 VIVAGLALFVGGFGLPAWW 136 >gi|240139030|ref|YP_002963505.1| Pilus assembly protein, type II secretion protein [Methylobacterium extorquens AM1] gi|240009002|gb|ACS40228.1| Pilus assembly protein, type II secretion protein [Methylobacterium extorquens AM1] Length = 323 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPT--ANTKRRK 58 M +N+ VGL+ V+ Y ++ Q + + V+ A RR+ Sbjct: 1 MSALNAPLAVGLVAVAAGSLAYVFLMPALSGERRAEQRRKALGQPQAVLAERGAAASRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++++E K +++ ++ +GL S+Q Y + S + + +++ S + Sbjct: 61 QVAKSLKELEAK---KDKTKVTLELRLARAGLDWSRQKYRVVSVITAVVLALVAFLASHN 117 Query: 119 FFTFLCVSVSSALVFPRFF 137 P ++ Sbjct: 118 VIVAGLALFVGGFGLPAWW 136 >gi|146338119|ref|YP_001203167.1| putative pilus assembly protein membrane protein [Bradyrhizobium sp. ORS278] gi|146190925|emb|CAL74930.1| putative pilus assembly protein; putative membrane protein [Bradyrhizobium sp. ORS278] Length = 324 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 17 VFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRKELREAIQKIELNHKA 73 + + Y +++ Q + V +A+ R + RR+++ +++ +E KA Sbjct: 16 IGGIAWVFIYPMLSGERKAEQRRSSVAKAEPVVRQVERNQRSRREQVESSLKDLEA--KA 73 Query: 74 KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVF 133 + + ++ IS +GL + Q ++I S V+GF+ ++ L + ++ L Sbjct: 74 QKQSKVPLNIRISQAGLDWTVQKFWIISGVLGFVVCAVAFFAGGGPLGALGLGFAAGLGL 133 Query: 134 PRF 136 PR+ Sbjct: 134 PRW 136 >gi|254561625|ref|YP_003068720.1| Pilus assembly protein, type II secretion protein [Methylobacterium extorquens DM4] gi|254268903|emb|CAX24864.1| Pilus assembly protein, type II secretion protein [Methylobacterium extorquens DM4] Length = 323 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPT--ANTKRRK 58 M +N+ VGL+ V+ Y ++ Q + + V+ A RR+ Sbjct: 1 MSALNAPLAVGLVAVAAGSLAYVFLMPALSGERRAEQRRKALGQPKAVLAERGAAASRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++++E K +++ ++ +GL S+Q Y + S + + + + +S + Sbjct: 61 QVAKSLKELEAK---KDKTKVTLELRLARAGLDWSRQKYRVVSAITAVVLALAAFFVSHN 117 Query: 119 FFTFLCVSVSSALVFPRFF 137 P ++ Sbjct: 118 VIVAGLALFVGGFGLPAWW 136 >gi|114568974|ref|YP_755654.1| type II secretion system protein [Maricaulis maris MCS10] gi|114339436|gb|ABI64716.1| type II secretion system protein [Maricaulis maris MCS10] Length = 327 Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 41/86 (47%) Query: 52 ANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVL 111 +R+++++E+++ +E + + + SI + I +G+ + +++ S + ++ Sbjct: 55 QAAQRKRQVQESLKDLEQRQRDQRKKSLSIKARIQQAGMSFTPAVFWMVSAGMAAAGLLI 114 Query: 112 SLTLSSSFFTFLCVSVSSALVFPRFF 137 + S + + S L PR++ Sbjct: 115 AFITGQSLLVTAGIGLVSGLGMPRWW 140 >gi|188581664|ref|YP_001925109.1| type II secretion system protein [Methylobacterium populi BJ001] gi|179345162|gb|ACB80574.1| type II secretion system protein [Methylobacterium populi BJ001] Length = 323 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 57/139 (41%), Gaps = 5/139 (3%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPT--ANTKRRK 58 M +N+ GL+ V+ Y +++ Q + ++ V+ A RR+ Sbjct: 1 MSALNAPLAAGLVAVASGALAYVFLMPLLSGERRAEQRRKALGQSRAVLAERGAAANRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++++E K +++ I+ +GL S++ Y I S V + + +S + Sbjct: 61 QVAKSLKELEAK---KDKTKVTLELRIARAGLDWSRRKYQIVSAVTAVGVALAAFLISHN 117 Query: 119 FFTFLCVSVSSALVFPRFF 137 L + P + Sbjct: 118 VIVALLGLFAGGFGLPAWM 136 >gi|154250693|ref|YP_001411517.1| type II secretion system protein [Parvibaculum lavamentivorans DS-1] gi|154154643|gb|ABS61860.1| type II secretion system protein [Parvibaculum lavamentivorans DS-1] Length = 328 Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 9/142 (6%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTA-------NT 54 D ++ + G+ ++ C AI + + + A+V RA A + Sbjct: 1 MDQSTLMIAGIAVLAALCIG-AIGFLFVGGESRSQKRVARVTRAGNARLVAVDGEVDNSE 59 Query: 55 KRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLT 114 KRRK+++E ++ +E + S+++ I +GL ++ +++YI S V G ++ Sbjct: 60 KRRKQMQETLKGLEEKQQE-HKKRVSLNTRIERAGLEMTTRNFYIASIVTGIAFFLVFKL 118 Query: 115 LSSSFFTFLCVSVSSALVFPRF 136 + S + FPR+ Sbjct: 119 VGLSLLVSALSGFAGGFGFPRW 140 >gi|115525753|ref|YP_782664.1| type II secretion system protein [Rhodopseudomonas palustris BisA53] gi|115519700|gb|ABJ07684.1| type II secretion system protein [Rhodopseudomonas palustris BisA53] Length = 324 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 59/139 (42%), Gaps = 5/139 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRK 58 + + + + TV+V + Y +++ Q A + R + R + RR+ Sbjct: 1 MQMQTLAIAFMATVAVGGVAWVFLYPLLSGEKKAEQRRASLARPEPVARQVDKGQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ +++++ + + +I + ++ +GL + +++YIGS V+G L Sbjct: 61 QVELTLKEVDARRQKE--KKVAISTRLTQAGLDWAPKNFYIGSAVLGAAVFALVYLSRGG 118 Query: 119 FFTFLCVSVSSALVFPRFF 137 + + ++ PR+ Sbjct: 119 ITPAVGLGFAAGFGLPRWL 137 >gi|118589707|ref|ZP_01547112.1| hypothetical protein SIAM614_04685 [Stappia aggregata IAM 12614] gi|118437793|gb|EAV44429.1| hypothetical protein SIAM614_04685 [Stappia aggregata IAM 12614] Length = 340 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 3 DVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR-----ADRVIPTANTKRR 57 ++ + L+ ++V +Y++F ++ + Q V R +R+ Sbjct: 11 EITGLAVALLVMLAVGGIIYSLFQPALSGSKRRDQRVNAVAARPQSENQRKALRDVDRRK 70 Query: 58 KELREAIQKIELNHKAKIGNT--KSIDSLISCSGLPISKQHYYIGSCVIGFIC-GVLSLT 114 + +++ +++ E KAK + I +GL H+ I S V G + + + Sbjct: 71 RSIQDQLKEFEERQKAKQDKQQKVPLKVKIEQAGLTWETHHFVIFSIVAGVVFLILGLII 130 Query: 115 LSSSFFTFLCVSVSSALVFPRFF 137 + + + +L FPR++ Sbjct: 131 GGGNLYIAAGFGFAGSLGFPRWY 153 >gi|220922783|ref|YP_002498085.1| type II secretion system protein [Methylobacterium nodulans ORS 2060] gi|219947390|gb|ACL57782.1| type II secretion system protein [Methylobacterium nodulans ORS 2060] Length = 322 Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 8/140 (5%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK---RR 57 M ++S + GL+ V+ YA ++ ++ + A R + RR Sbjct: 1 MTSLDSLIVAGLLAVAAAALAYAFIVPLLPEQARAAKRQQAI--AGRRPVAERIQAVNRR 58 Query: 58 KELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSS 117 ++ ++++++E K S+D ++ SGL I+K +Y S + + V L LS Sbjct: 59 DQVAKSLKELENKEKKA---RPSLDLRLTQSGLSITKPQFYAFSGIAAGLSAVTMLLLSG 115 Query: 118 SFFTFLCVSVSSALVFPRFF 137 S L + + L P++ Sbjct: 116 SLLLCLATAFVAGLGLPQWL 135 >gi|148258239|ref|YP_001242824.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] gi|146410412|gb|ABQ38918.1| putative pilus assembly protein [Bradyrhizobium sp. BTAi1] Length = 324 Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 54/123 (43%), Gaps = 5/123 (4%) Query: 17 VFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRKELREAIQKIELNHKA 73 + + Y +++ Q + V +++ R RR+++ +++ +E KA Sbjct: 16 IGGIAWVFLYPMLSGERKAEQRRSSVAKSEPVVRQAERNQRSRREQVESSLKDLEA--KA 73 Query: 74 KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVF 133 + + ++ IS +GL + Q ++I S V+GF+ ++ L + ++ Sbjct: 74 QKQSKVPLNLRISQAGLDWTVQKFWIISGVLGFMAAAIAFFGGGGPLGALGLGFAAGFGL 133 Query: 134 PRF 136 PR+ Sbjct: 134 PRW 136 >gi|296444391|ref|ZP_06886356.1| Type II secretion system F domain protein [Methylosinus trichosporium OB3b] gi|296258038|gb|EFH05100.1| Type II secretion system F domain protein [Methylosinus trichosporium OB3b] Length = 322 Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 11/140 (7%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA--DRVI---PTANTKR 56 D S L ++V +YA+ Y ++ GD K+Q + A DR KR Sbjct: 1 MDRQSLIGATLAALAVGGVMYAVVYPYLS-GDFKAQKRTAALMASGDRRREGRSADPAKR 59 Query: 57 RKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 RK ++++++ IE K +++ I+ +GL +S+ + IG+ V G + S L+ Sbjct: 60 RKMIQDSLKDIETKAKQ-----ITLEQRIAQAGLAVSRSLFMIGAGVAGLFAALFSFILN 114 Query: 117 SSFFTFLCVSVSSALVFPRF 136 + V V+ + P + Sbjct: 115 QDPLLAIGVGVAVGVGLPHW 134 >gi|218530658|ref|YP_002421474.1| type II secretion system protein [Methylobacterium chloromethanicum CM4] gi|218522961|gb|ACK83546.1| type II secretion system protein [Methylobacterium chloromethanicum CM4] Length = 323 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPT--ANTKRRK 58 M +N+ VGL+ V+ Y ++ Q + + V+ A RR+ Sbjct: 1 MSALNAPLAVGLVAVAAGSLAYVFLMPALSGERRAEQRRRALGQPQAVLAERGAAASRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++++E K +++ ++ +GL S+Q Y + S + + + + +S + Sbjct: 61 QVAKSLKELEAK---KDKTKVTLELRLARAGLDWSRQKYRVVSAITAVVLALAAFLVSHN 117 Query: 119 FFTFLCVSVSSALVFPRFF 137 P ++ Sbjct: 118 VIVAGLALFVGGFGLPAWW 136 >gi|110632960|ref|YP_673168.1| type II secretion system protein [Mesorhizobium sp. BNC1] gi|110283944|gb|ABG62003.1| type II secretion system protein [Chelativorans sp. BNC1] Length = 338 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 7/138 (5%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRV-----IPTANTKRRKELR 61 + T+SV A+FY + + + RRK + Sbjct: 14 LMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTAPADEDRDRRKSVE 73 Query: 62 EAIQKIELNHKAKIGN--TKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSF 119 + ++++E KAK ++ + +GL +++ Y+ V G + ++L L + Sbjct: 74 KTLRELEEKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGALTFPVALLLGAGS 133 Query: 120 FTFLCVSVSSALVFPRFF 137 + +++ L+ P F+ Sbjct: 134 LVSVGFALAGGLLLPHFY 151 >gi|83859361|ref|ZP_00952882.1| hypothetical protein OA2633_13190 [Oceanicaulis alexandrii HTCC2633] gi|83852808|gb|EAP90661.1| hypothetical protein OA2633_13190 [Oceanicaulis alexandrii HTCC2633] Length = 331 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 56/120 (46%), Gaps = 7/120 (5%) Query: 24 IFYNVINPGDSKSQDNAKV---VRADRVIP---TANTKRRKELREAIQKIELNHKAKIGN 77 +F K++ V V++ R A ++R++++E ++++E + KA+ Sbjct: 24 VFVGSSADKARKARLEGAVGGPVQSTRRRVGAVDAAAQKRRQIQEGLKELEDSQKAERKK 83 Query: 78 TKSIDSLISCSGL-PISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 + ++ + + +GL ++I S ++GF+ + + + + ++ + L PR+ Sbjct: 84 SLTLRARLDQAGLFKTGPTQFWIFSAILGFVAAFMVVVTGLNILFAVAAAIIAGLGLPRW 143 >gi|300021858|ref|YP_003754469.1| type II secretion system protein F [Hyphomicrobium denitrificans ATCC 51888] gi|299523679|gb|ADJ22148.1| Type II secretion system F domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 332 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 7/130 (5%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK----RRKELREAIQKI 67 L ++ +YA+ Y + K + VV R + A ++ R+K + + ++++ Sbjct: 17 LAALAFAGGIYALAYPYFSGDREKDKRLESVVGRSRKVGGALSEIQSSRKKSVADTLKEM 76 Query: 68 ELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVS- 126 E AK ++ + +G+ + + +YIGS + G + G L + V+ Sbjct: 77 EDRQNAK--KKITMGLRLERAGVKWTPRDFYIGSAIAGIVLGGLCFNFLNLPIAATVVAL 134 Query: 127 VSSALVFPRF 136 A PR+ Sbjct: 135 FVGAFGIPRW 144 >gi|75674495|ref|YP_316916.1| type II secretion system protein [Nitrobacter winogradskyi Nb-255] gi|74419365|gb|ABA03564.1| type II secretion system protein [Nitrobacter winogradskyi Nb-255] Length = 324 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 62/139 (44%), Gaps = 5/139 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 ++ + L + +V + Y V++ + A + R A R + A RR+ Sbjct: 1 MNLQTLALAFMAATAVGGVAWVFLYPVLSGEMKAEKRRAALARTSPAIRQVDRAQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ E++++IE + K ++++ I+ +GL SK+ + I S ++ + + L + Sbjct: 61 QIEESLREIE--QRQKRDRKVTLNNRIAQAGLSWSKEKFLIVSGILALASFAVPIVLGAG 118 Query: 119 FFTFLCVSVSSALVFPRFF 137 ++ ++ PR+ Sbjct: 119 PLAAAGLAFAAGFGVPRWL 137 >gi|323137429|ref|ZP_08072507.1| Type II secretion system F domain [Methylocystis sp. ATCC 49242] gi|322397416|gb|EFX99939.1| Type II secretion system F domain [Methylocystis sp. ATCC 49242] Length = 326 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 19 CFLYAIFYNVINPGDSKSQDNAKVVRADR--------VIPTANTKRRKELREAIQKIELN 70 +YA Y ++ G+ K+Q + + R KRRK + E+++++E Sbjct: 17 GVMYAFVYPYLS-GEIKAQKRTAALTSGRSERGAVAGRGTVDPAKRRKMIAESLKEVENQ 75 Query: 71 HKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSA 130 +K K +++ I +GL + Q + IGS G + L ++ + + Sbjct: 76 NKKK---KLTLEQRIMQAGLTWTPQVFLIGSVAFGLLVAFFLLVVNGDIMVVIGGAAVGI 132 Query: 131 LVFPRFF 137 P + Sbjct: 133 FGLPNWL 139 >gi|302381752|ref|YP_003817575.1| type II secretion system F domain protein [Brevundimonas subvibrioides ATCC 15264] gi|302192380|gb|ADK99951.1| Type II secretion system F domain protein [Brevundimonas subvibrioides ATCC 15264] Length = 326 Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Query: 39 NAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYY 98 +A +V RRK + +++ E + ++ + + +G+ + + ++ Sbjct: 44 RTARAKAAKVEANTPEARRKAIELQLKEAERKERKA---RMTMKARLKHAGMSMGIRTFW 100 Query: 99 IGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRF 136 I S +G + ++ L + F + +++ L PR+ Sbjct: 101 IISACLGVVAFLMPLVFGLNIFVAIGIALVVGLGLPRW 138 >gi|91977989|ref|YP_570648.1| type II secretion system protein [Rhodopseudomonas palustris BisB5] gi|91684445|gb|ABE40747.1| type II secretion system protein [Rhodopseudomonas palustris BisB5] Length = 324 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 + + L V+V + Y +++ + + V R A R + RR+ Sbjct: 1 MQMQALSLGFFAAVAVGGLAWVFLYPMLSGEKQAEKRRSSVARVTPAVRQVERTQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ +++ IE K K N ++ + ++ +GL + + + S V+G +++ Sbjct: 61 QVEGSLRDIEAR-KQKQKN-VALSTRLTQAGLDWTPKKFITISAVLGVFVFAVTMLFGGG 118 Query: 119 FFTFLCVSVSSALVFPRFF 137 ++ ++ PR+ Sbjct: 119 LTAAAGLAFAAGFGLPRWM 137 >gi|85713509|ref|ZP_01044499.1| type II secretion system protein [Nitrobacter sp. Nb-311A] gi|85699413|gb|EAQ37280.1| type II secretion system protein [Nitrobacter sp. Nb-311A] Length = 324 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 59/139 (42%), Gaps = 5/139 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRK 58 ++ + L + +V + Y ++ + A R R + A RR+ Sbjct: 1 MNLQTLALGFMAATAVGGVAWVFLYPALSGEMKAEKRRAAFARTTPAIRQVDRAQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++IE + K +++ I+ +GL SK+ + I S V+ IC + + L + Sbjct: 61 QIEGSLREIE--QRQKRDRKLTLNHRIAQAGLSWSKEKFLIVSGVLAMICFSVPMILGAG 118 Query: 119 FFTFLCVSVSSALVFPRFF 137 ++ ++ PR+ Sbjct: 119 PLAAAGLAFAAGFGVPRWL 137 >gi|27376546|ref|NP_768075.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] gi|27349687|dbj|BAC46700.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 51/124 (41%), Gaps = 6/124 (4%) Query: 17 VFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK----RRKELREAIQKIELNHK 72 V + Y +++ A + RAD K RR+++ +++ +E + Sbjct: 31 VGGIAWVFLYPLLSGERKAENRRASIARADAPAAKQTEKSQRSRREQVETSLKDLEARRQ 90 Query: 73 AKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALV 132 + + ++ +S +GL + Q ++I S V+ + V ++ + ++ + Sbjct: 91 QE--KSVPLNIRLSQAGLDWTPQKFWIVSAVVAGVLFVAAMFVGGGLLGGAGLAFAGGFG 148 Query: 133 FPRF 136 PR+ Sbjct: 149 LPRW 152 >gi|254420696|ref|ZP_05034420.1| Bacterial type II secretion system protein F domain [Brevundimonas sp. BAL3] gi|196186873|gb|EDX81849.1| Bacterial type II secretion system protein F domain [Brevundimonas sp. BAL3] Length = 326 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 56 RRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTL 115 RRK++ +Q+ E + N + + + +GL IS + +YI S +G I V +L Sbjct: 61 RRKQIMVQLQEAERRERKARAN---MAAKLKQAGLTISVRTFYIVSGGVGLIAAVAALAF 117 Query: 116 SSSFFTFLCVSVSSALVFPRF 136 L +++ L PR+ Sbjct: 118 GLHVLIVLGLAIVVGLGLPRW 138 >gi|90425201|ref|YP_533571.1| type II secretion system protein [Rhodopseudomonas palustris BisB18] gi|90107215|gb|ABD89252.1| type II secretion system protein [Rhodopseudomonas palustris BisB18] Length = 324 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 60/136 (44%), Gaps = 5/136 (3%) Query: 4 VNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRKEL 60 + + + L ++V + Y ++ + Q A + R + R I RR+++ Sbjct: 3 IQTLAIAFLSAMAVGGLAWVFIYPSLSGQKTAEQRRASLARPEPVVRQIDRTQRSRREQV 62 Query: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 +++++E H+ + ++ + ++ +G+ + + + IGS V+G ++ L Sbjct: 63 EGSLKEVEARHRKE--KKVALTTRLTQAGVKWTPKGFLIGSAVLGVTMFAITSLLGGGLL 120 Query: 121 TFLCVSVSSALVFPRF 136 L + ++ PR+ Sbjct: 121 AALALGFAAGFGLPRW 136 >gi|220923699|ref|YP_002499001.1| type II secretion system protein [Methylobacterium nodulans ORS 2060] gi|219948306|gb|ACL58698.1| type II secretion system protein [Methylobacterium nodulans ORS 2060] Length = 327 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 5/136 (3%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA----DRVIPTANTKRRKELRE 62 + L S L A F+ + + + V + R + + +R++ ++E Sbjct: 5 LLVFFLGAFSTGGLLLAAFHPRLARTSALDRRLQLVRASAGQTTRAAGSDDNRRKRSVQE 64 Query: 63 AIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIG-FICGVLSLTLSSSFFT 121 +++ E KAK S+ + + L SK YY +G + + Sbjct: 65 LLRETEQKQKAKNSAKLSLVMRLRQADLGWSKSTYYTICLTVGTLAFLAMWGLMGLGLLP 124 Query: 122 FLCVSVSSALVFPRFF 137 + + ++ P + Sbjct: 125 AVGFGLCGGMLLPHLY 140 >gi|254293218|ref|YP_003059241.1| type II secretion system protein [Hirschia baltica ATCC 49814] gi|254041749|gb|ACT58544.1| type II secretion system protein [Hirschia baltica ATCC 49814] Length = 331 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 6/136 (4%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA----DRVIPTANTKRRKELRE 62 + + GL VSV +A K V A RRK++++ Sbjct: 8 YLIAGLAFVSVVGVGFAFTGGGTTKAQQKRFKQVAVGAGSGGKKNSSVDATLMRRKQMQD 67 Query: 63 AIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFF 120 +++ + + +T+ +I ++ +G I +++ S V G + ++ L + Sbjct: 68 SMKTLRERENKRRKDTRGRTIKDKLAQAGWTIEPAMFWVLSAVTGVVVAGITFVLGQTPL 127 Query: 121 TFLCVSVSSALVFPRF 136 + AL PR+ Sbjct: 128 IIAGAGFAGALGLPRW 143 >gi|192292570|ref|YP_001993175.1| type II secretion system protein [Rhodopseudomonas palustris TIE-1] gi|192286319|gb|ACF02700.1| type II secretion system protein [Rhodopseudomonas palustris TIE-1] Length = 324 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 57/138 (41%), Gaps = 5/138 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRK 58 ++ + L ++V + Y +++ + Q V R+ R RR+ Sbjct: 1 MEMQTLALGFFAAIAVGGVAWVFVYPLLSGEKTVEQRLTFVARSTPTVRQADRTQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++IE ++ + + + +S +GL + + + S +G +++ L +S Sbjct: 61 QIEGSLKEIETRNEKQKN--VPLTAKLSQAGLDWTPGKFGVVSASLGIFMLGIAIILGAS 118 Query: 119 FFTFLCVSVSSALVFPRF 136 + ++ PR+ Sbjct: 119 LPAAAGLGFAAGFGLPRW 136 >gi|254473793|ref|ZP_05087188.1| type II secretion system protein [Pseudovibrio sp. JE062] gi|211957179|gb|EEA92384.1| type II secretion system protein [Pseudovibrio sp. JE062] Length = 339 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 7/138 (5%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA-----DRVIPTANTKRRKELR 61 + + LI +SV + + + + + + V + T RRK ++ Sbjct: 15 YLITALIMISVVGVTFTLLAPLFSKDKLGKRKESLVQKDISGLKGSNKKLDITARRKSVQ 74 Query: 62 EAIQKIELNHKAKIGNT--KSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSF 119 + + +E AK N I +GL +K YY S + G + ++S+ S Sbjct: 75 DQLNAMEAAQAAKKKNADKPIFADWIGQAGLNWTKPRYYAYSVICGVLLFLVSMLSGQSI 134 Query: 120 FTFLCVSVSSALVFPRFF 137 + L + PRF+ Sbjct: 135 WISLALLFVGIFGLPRFY 152 >gi|39936744|ref|NP_949020.1| type II secretion system protein [Rhodopseudomonas palustris CGA009] gi|39650600|emb|CAE29123.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 324 Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 57/138 (41%), Gaps = 5/138 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRK 58 ++ + L ++V + Y +++ + Q V R+ R RR+ Sbjct: 1 MEMQTLALGFFAAIAVGGVAWVFVYPLLSGEKTVEQRLTFVARSTPTVRQADRTQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ +I++IE ++ + + + +S +GL + + + S +G +++ L +S Sbjct: 61 QIEGSIKEIETRNEKQKN--VPLTAKLSQAGLDWTPGKFGVVSASLGIFMLGIAIILGAS 118 Query: 119 FFTFLCVSVSSALVFPRF 136 + ++ PR+ Sbjct: 119 LPAAAGLGFAAGFGLPRW 136 >gi|167648148|ref|YP_001685811.1| type II secretion system protein [Caulobacter sp. K31] gi|167350578|gb|ABZ73313.1| type II secretion system protein [Caulobacter sp. K31] Length = 325 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 11/138 (7%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK--------RRK 58 + + G++ L + + + DR A K RRK Sbjct: 3 FIIAGVLGFITIAGLGFVLAGGDGGSAKTVKRAQLIAGGDRQAVAARAKAAANSPDARRK 62 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++ ++ + K + SI + + +GL + ++++I S VIG G + L L Sbjct: 63 QI---LKTLKEQDQQKKKASLSIAARLRAAGLGDNTRNFWIISGVIGLTAGAILLLLRQM 119 Query: 119 FFTFLCVSVSSALVFPRF 136 L + + PR+ Sbjct: 120 PLIALGAAFGAGFGLPRW 137 >gi|315497461|ref|YP_004086265.1| type II secretion system f domain protein [Asticcacaulis excentricus CB 48] gi|315415473|gb|ADU12114.1| Type II secretion system F domain protein [Asticcacaulis excentricus CB 48] Length = 326 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 31 PGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGL 90 + ++ ++ A+R +RRK++ +++ E + S+ + + +GL Sbjct: 40 GATTAAKRKSQRTAANRTP----EERRKQILLQLKESEQRERKA---RLSLTARLQHAGL 92 Query: 91 PISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 + + ++I S +G V+ L +S L + PR++ Sbjct: 93 TPNVKTFWIWSVALGIAAAVIVLVVSRIPLAALGAGFAFGYGAPRWW 139 >gi|329890993|ref|ZP_08269336.1| bacterial type II secretion system protein F domain protein [Brevundimonas diminuta ATCC 11568] gi|328846294|gb|EGF95858.1| bacterial type II secretion system protein F domain protein [Brevundimonas diminuta ATCC 11568] Length = 327 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 56 RRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTL 115 RRK++ +Q+++ + ++ + + +GL +S + + I S G + +L+ L Sbjct: 62 RRKQILLQLQEVDRRERKA---RMTMGAKLKQAGLSLSVRTFVIISVAAGLVGALLAFVL 118 Query: 116 SSSFFTFLCVSVSSALVFPRF 136 ++ L V V++ L PR+ Sbjct: 119 GANIIIVLGVGVAAGLGLPRW 139 >gi|304392380|ref|ZP_07374321.1| type II secretion system protein [Ahrensia sp. R2A130] gi|303295484|gb|EFL89843.1| type II secretion system protein [Ahrensia sp. R2A130] Length = 332 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 10/125 (8%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADR-------VIPTANTKRRKELREAIQKIE-LNHKA 73 YA+ YN I D KS++ + ++ D+ +RRK A++ ++ K Sbjct: 22 YALLYNSI-ASDKKSKERMQRLQMDKKTKMKVESRKMDEKQRRKSREAALKNVDDQKSKG 80 Query: 74 KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLT-LSSSFFTFLCVSVSSALV 132 K ++ ++ +G IS +Y+ S VIG + ++L + ++ V Sbjct: 81 KTAGKETFREILEQAGFTISLGKFYVVSAVIGILFFFIALVFMGATLPIAGGVGFVMGFG 140 Query: 133 FPRFF 137 PR++ Sbjct: 141 APRWW 145 >gi|150377236|ref|YP_001313831.1| type II secretion system protein [Sinorhizobium medicae WSM419] gi|150031783|gb|ABR63898.1| type II secretion system protein [Sinorhizobium medicae WSM419] Length = 332 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 6/136 (4%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPT--ANTKRRKELRE 62 F+ L + S+ + A FY ++ + Q A++ R PT RR+ + + Sbjct: 10 FVFLLASTSIGGVMVAAFYPRVSKASAYRQRLARMSAPAENKRSEPTEPDGRDRRRSVEK 69 Query: 63 AIQKIEL-NHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFT 121 +++IE ++ + + SGL S + Y++ L L + Sbjct: 70 TLREIEEKRQANARKGKTTLTARLRQSGLHWSPKTYFVVCACAALASWCAMLLLDTGALV 129 Query: 122 FLCVSVSSALVFPRFF 137 ++S L+ P + Sbjct: 130 SAGFAISGGLLLPHVY 145 >gi|316933035|ref|YP_004108017.1| Type II secretion system F domain [Rhodopseudomonas palustris DX-1] gi|315600749|gb|ADU43284.1| Type II secretion system F domain [Rhodopseudomonas palustris DX-1] Length = 324 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 56/138 (40%), Gaps = 5/138 (3%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIPTANTKRRK 58 ++ + L V+V + Y +++ + + V R A R + RR+ Sbjct: 1 MEMQTLALGFFAAVAVGGVAWVFIYPLLSGEKNVEKRLTSVARTTPAVRQVDRTQRSRRE 60 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 ++ ++++IE + + + +S +GL + + + S IG + +++ + + Sbjct: 61 QIEGSLKEIETRSQKQKN--VPLGMRLSQAGLDWTPAKFGVVSAAIGVVVLGIAIMIGTG 118 Query: 119 FFTFLCVSVSSALVFPRF 136 + ++ PR+ Sbjct: 119 LVAAAGLGFAAGFGLPRW 136 >gi|227818620|ref|YP_002822591.1| pilus assembly protein TadB [Sinorhizobium fredii NGR234] gi|36958876|gb|AAQ87301.1| TadB-like protein involved in pilus formation and/or protein secretion [Sinorhizobium fredii NGR234] gi|227337619|gb|ACP21838.1| pilus assembly protein TadB [Sinorhizobium fredii NGR234] Length = 332 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 6/135 (4%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRV----IPTANTKRRKELREA 63 + L + V + A FY + Q +V ++ + RR+ + + Sbjct: 10 LIFFLASSFVGGLMLAAFYPRTVKASAYRQRFERVAGHTQINRTGSADESRDRRRSVEKT 69 Query: 64 IQKIELNHKA--KIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFT 121 ++ IE KA + G +++ + +GL S + Y++ G VL L F Sbjct: 70 LRDIEEQQKAHVRKGRKPKLEARLRQAGLGWSTRAYWVACAGTGLAIYVLVALLGLGAFA 129 Query: 122 FLCVSVSSALVFPRF 136 L + + L P F Sbjct: 130 ALGFATAGGLYLPHF 144 >gi|329847257|ref|ZP_08262285.1| bacterial type II secretion system protein F domain protein [Asticcacaulis biprosthecum C19] gi|328842320|gb|EGF91889.1| bacterial type II secretion system protein F domain protein [Asticcacaulis biprosthecum C19] Length = 337 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 9/100 (9%) Query: 43 VRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSC 102 R + + +RRK++ E +++ E + ++ S + +GL + ++I + Sbjct: 53 KRGGKSAAKSPEERRKQITEQLKEAEKRERKA---RLTLRSRMLHAGLTPNVTQFWIITA 109 Query: 103 VIGFICGVLSLTLSSSF------FTFLCVSVSSALVFPRF 136 V+G + V+ L L L + + PR+ Sbjct: 110 VLGVVAFVVPLVLLGKMDFMLRLLVALGAGFALSYGAPRW 149 >gi|307318084|ref|ZP_07597520.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] gi|306896125|gb|EFN26875.1| Type II secretion system F domain protein [Sinorhizobium meliloti AK83] Length = 333 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 54/137 (39%), Gaps = 7/137 (5%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIP--TANTKRRKELRE 62 F+ L + S+ + A FY ++ + Q ++ R P T RR+ + + Sbjct: 10 FVFLLASTSIGGMMVAAFYPRVSKASAYRQRFERISARAEDKRSEPAETDGRDRRRSVEK 69 Query: 63 AIQKIEL-NHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFIC-GVLSLTLSSSFF 120 +++IE ++ + + SGL S++ Y++ V+ L L Sbjct: 70 TLREIEEKRQANARKGKVTLSARLRQSGLHWSRKAYFLVCAGAALATWVVMLLLLGLGPL 129 Query: 121 TFLCVSVSSALVFPRFF 137 + +++ L+ P + Sbjct: 130 VSVGFAIAGGLLLPHLY 146 >gi|295690794|ref|YP_003594487.1| type II secretion system F domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432697|gb|ADG11869.1| Type II secretion system F domain protein [Caulobacter segnis ATCC 21756] Length = 325 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 58/141 (41%), Gaps = 15/141 (10%) Query: 7 WFLVGLIT-VSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK---------R 56 + L G++ +++ +A + + A+V+ A V A R Sbjct: 3 FILAGVLGFITIAGLGFAFVGDDSQASK--AAKRAQVIGAGGVDRQAAKNKPAANPNEVR 60 Query: 57 RKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 R+ + +A+++ E K T SI + + +GL + + +++ S + ++ L L Sbjct: 61 RQTILKALKEQERKQKKA---TLSIAARMQAAGLGPNVRLFWMVSLGLAVGVILIVLALG 117 Query: 117 SSFFTFLCVSVSSALVFPRFF 137 + + L ++ L PR+ Sbjct: 118 QTVWIALGAGFAAGLGLPRWL 138 >gi|16263304|ref|NP_436097.1| Pilus assembly protein [Sinorhizobium meliloti 1021] gi|307304377|ref|ZP_07584128.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] gi|14523983|gb|AAK65509.1| Pilus assembly protein [Sinorhizobium meliloti 1021] gi|306902579|gb|EFN33173.1| Type II secretion system F domain protein [Sinorhizobium meliloti BL225C] Length = 333 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 54/137 (39%), Gaps = 7/137 (5%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR---ADRVIP--TANTKRRKELRE 62 F+ L + S+ + A FY ++ + Q ++ R P T RR+ + + Sbjct: 10 FVFLLASTSIGGMMVAAFYPRVSKASAYRQRFERISARAEDKRSEPAETDGRDRRRSVEK 69 Query: 63 AIQKIEL-NHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFIC-GVLSLTLSSSFF 120 +++IE ++ + + SGL S++ Y++ V+ L L Sbjct: 70 TLREIEEKRQANARKGKVTLSARLRQSGLHWSRKAYFLVCAGATLATWVVMLLLLGLGPL 129 Query: 121 TFLCVSVSSALVFPRFF 137 + +++ L+ P + Sbjct: 130 VSVGFAIAGGLLLPHLY 146 >gi|114798049|ref|YP_761687.1| secretion system protein [Hyphomonas neptunium ATCC 15444] gi|114738223|gb|ABI76348.1| secretion system protein [Hyphomonas neptunium ATCC 15444] Length = 339 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 26/152 (17%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADR--------VIPTANTKRRK 58 + + L +++ + D ++ A+ + A R + N +RR Sbjct: 4 YIVAALAFLAIAGLGLVL----TGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRA 59 Query: 59 ELREAIQKIELNHKAKIGNTK--SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 + +E ++ + K + N +I S ++ +GL I +++ S V G IC + Sbjct: 60 KTQEMLEGLRRQDKERRRNDPMRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISG 119 Query: 117 SSFFTFLCVS------------VSSALVFPRF 136 + +S L P+F Sbjct: 120 ADGLVINGISLKSRPVLIAAAFFGGTLGIPQF 151 >gi|218682228|ref|ZP_03529829.1| probable pilus assembly protein [Rhizobium etli CIAT 894] Length = 90 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTK 79 + IN S D KV A R +KRRK +++ ++ +E K T Sbjct: 39 SRINRVKSAEVDRVKVKAA-RDRVQELSKRRKSVQDNLKDLEKRQHEKTKKTL 90 >gi|16127171|ref|NP_421735.1| hypothetical protein CC_2941 [Caulobacter crescentus CB15] gi|221235972|ref|YP_002518409.1| TadB-like pilus assembly protein [Caulobacter crescentus NA1000] gi|7208429|gb|AAF40196.1|AF229646_8 TadB [Caulobacter crescentus CB15] gi|13424567|gb|AAK24903.1| hypothetical protein CC_2941 [Caulobacter crescentus CB15] gi|220965145|gb|ACL96501.1| TadB-related pilus assembly protein [Caulobacter crescentus NA1000] Length = 325 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 11/138 (7%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK--------RRK 58 + L G++ L F + ++ + + K RR+ Sbjct: 3 FVLAGILGFITIAGLGFAFAGGDSASSKAAKRAQIIAKGGERQANVRAKAAANTPDARRQ 62 Query: 59 ELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSS 118 + +A++ + K + SI + + +GL + + ++I S +G ++ L L S Sbjct: 63 AILKALKDQDRKQKKA---SLSIAARLQAAGLGDNVKMFWIVSGTLGLFIAMIILLLGQS 119 Query: 119 FFTFLCVSVSSALVFPRF 136 L ++ PR+ Sbjct: 120 PLVALGAGFAAGAGLPRW 137 >gi|170750193|ref|YP_001756453.1| type II secretion system protein [Methylobacterium radiotolerans JCM 2831] gi|170656715|gb|ACB25770.1| type II secretion system protein [Methylobacterium radiotolerans JCM 2831] Length = 325 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 4/111 (3%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTA--NTKRRKELREAIQ 65 GL+ ++V Y ++ ++ + + T RR+++ + + Sbjct: 9 IAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRREQVAKTLS 68 Query: 66 KIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 +IE KAK + S++ ++ +GL +KQ +Y S + G + G+L ++ Sbjct: 69 EIEA--KAKGASKASVELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVIT 117 >gi|94497257|ref|ZP_01303829.1| hypothetical protein SKA58_13683 [Sphingomonas sp. SKA58] gi|94423362|gb|EAT08391.1| hypothetical protein SKA58_13683 [Sphingomonas sp. SKA58] Length = 332 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 5/131 (3%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNH 71 LI V + L + P K++ R +A +R AI Sbjct: 7 LIAVLLAAMLGMVAMAFAGPSPEKARKRRVATIRGRHGESAEALLEARMRRAISNRPTGA 66 Query: 72 KAK-----IGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVS 126 +AK + N ++ I +G + Y +I + L FF + V Sbjct: 67 EAKMLVSLVPNPDNLTKRIKMTGKKWTLSQYMTACAIIFLLITALLALRGFPFFFAMLVG 126 Query: 127 VSSALVFPRFF 137 ++ L P ++ Sbjct: 127 AAAGLGLPHWW 137 >gi|328952511|ref|YP_004369845.1| Type II secretion system F domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452835|gb|AEB08664.1| Type II secretion system F domain protein [Desulfobacca acetoxidans DSM 11109] Length = 317 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 53/127 (41%), Gaps = 4/127 (3%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKI 67 + GL+ ++VF + A ++ + ++ + + R + +R+ + + Sbjct: 4 LIAGLVFLTVFGLVLAFYFGYEDLKQARKDQLIRSLTVGRRRG-DRMPEEEAVRQETRFL 62 Query: 68 ELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSV 127 + + +++LI + +S + +++ S GF+ +L L L + ++ Sbjct: 63 TML--LTRVDLSGLETLIQSAWAGLSLERFFLVSVCCGFVFMLLPLLLFGNAVLSF-LAF 119 Query: 128 SSALVFP 134 ++ L P Sbjct: 120 AAGLCLP 126 >gi|46201039|ref|ZP_00055942.2| COG4965: Flp pilus assembly protein TadB [Magnetospirillum magnetotacticum MS-1] Length = 331 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 5/131 (3%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRAD---RVIPTANTKRRKELREAI 64 LV ++ V++ +++F + P + A V +RK ++ + Sbjct: 14 VLVAVMLVTLAVLGWSLFTLLHGPRARLKRRLAAVAGGSHGAERRLAGRMPQRKSVQARL 73 Query: 65 QKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLC 124 + +E G + + +G + HY GS + L L + Sbjct: 74 KAVEGARARNFGWR--LREQLLQAGWNLEVWHYLAGSGGLTLAVFALGQVLGLAMVWSGL 131 Query: 125 VSVSSALVFPR 135 ++ + P+ Sbjct: 132 AALCLGVGVPK 142 >gi|289616194|emb|CBI56990.1| unnamed protein product [Sordaria macrospora] Length = 1134 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%) Query: 33 DSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCS 88 D AK V A++ + A KRR+E+++ I+K+ K ++ + S Sbjct: 1048 DEVEARRAKAVEAEKEMSLAREKRREEMQQQIKKLAEAQAQKTAAAPAVADQVVTS 1103 >gi|83312844|ref|YP_423108.1| Flp pilus assembly protein TadB [Magnetospirillum magneticum AMB-1] gi|82947685|dbj|BAE52549.1| Flp pilus assembly protein TadB [Magnetospirillum magneticum AMB-1] Length = 330 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 36/114 (31%), Gaps = 5/114 (4%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTANTKR---RKELREAIQKIELNHKAKIGNTKSI 81 ++I+ ++ + V + R RK ++ ++ +E + + G Sbjct: 30 LVSLIHGPRARLKRRLAAVAGGQTSSRRTAVRGPQRKSVQARLKAVEGSRQRHFGWR--F 87 Query: 82 DSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPR 135 + +G + Y G V+ + + ++ L P+ Sbjct: 88 REQLMQAGWRLEVWQYLAGCAVLALLVLGIGEASGLPLVWSGLAALCLGLGIPK 141 >gi|268325260|emb|CBH38848.1| hypothetical membrane protein [uncultured archaeon] Length = 442 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 4/125 (3%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQK 66 W ++ + ++S+ + A Y D + A +++ A + E I Sbjct: 177 WRIIVIYSLSLIILIAAAVYYSTRAADYTLLSRIQKEAASQILDIAIADDKDISSENITN 236 Query: 67 IELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVS 126 + + I N KS+ +S + S V G I ++ L S+ + Sbjct: 237 LSKSLNTTIKNVKSMMYKLS----NMLSAKELAVSGVFGAIALFVAFILGSAILMATGIP 292 Query: 127 VSSAL 131 S L Sbjct: 293 ASGGL 297 >gi|294012436|ref|YP_003545896.1| Flp pilus assembly protein TadB [Sphingobium japonicum UT26S] gi|292675766|dbj|BAI97284.1| Flp pilus assembly protein TadB [Sphingobium japonicum UT26S] Length = 332 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 5/128 (3%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNH 71 L+ V + L + P K+Q + R + + +R+AI + Sbjct: 7 LMAVLLATMLGLVVMAFSGPSPEKAQKRRMELIRGRHSDSTDAILEARMRKAISNRPAGN 66 Query: 72 KAK-----IGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVS 126 +A + N +++ I +G + Y VI L + + + Sbjct: 67 EASMLVSLVPNPENLAKRIRMTGKKWTVSQYMTACAVIFLALCALLMLRGFPPLFAVMLG 126 Query: 127 VSSALVFP 134 +++ L P Sbjct: 127 LAAGLGLP 134 >gi|228982434|ref|ZP_04142693.1| hypothetical protein bthur0002_55670 [Bacillus thuringiensis Bt407] gi|228776617|gb|EEM24925.1| hypothetical protein bthur0002_55670 [Bacillus thuringiensis Bt407] Length = 314 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 53/125 (42%), Gaps = 6/125 (4%) Query: 10 VGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIEL 69 +G V F+ AI + I+ + +D + + A++K R+ + + + Sbjct: 1 MGYAIVVFTVFMLAIIF--ISTKEKMKEDKSVLTM---RKSQASSKLRENALKLKLERMV 55 Query: 70 NHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSS 129 KAK+ +++++ +G ++ + + S + +L L ++S+ C+ + Sbjct: 56 ETKAKVSTKNTVETMCLQAGYKLTYGEFKLMSFTSAIVLPILVLVMTSNPILA-CLFIMV 114 Query: 130 ALVFP 134 + P Sbjct: 115 GYMIP 119 >gi|254496019|ref|ZP_05108922.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254354768|gb|EET13400.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 616 Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 50/126 (39%), Gaps = 6/126 (4%) Query: 14 TVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKA 73 +++ ++ I + + + ++Q N ++ + ++ I R K L +A+++ E + Sbjct: 292 ALTIVLLVFDISVALWDFAEQQTQHNVEMAQYNQDIAALTAAREKLLSDALEEAETEDER 351 Query: 74 KIGNTK------SIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSV 127 K+ K ++ Q + + + I +L+ + ++ F + + Sbjct: 352 KLAAYKMQMQLDTLKRAQKRCARDWELQKLGLYNNIGYAIGLMLAFIVLTAPFMPVAAAT 411 Query: 128 SSALVF 133 + L Sbjct: 412 AVTLGI 417 >gi|87199098|ref|YP_496355.1| type II secretion system protein [Novosphingobium aromaticivorans DSM 12444] gi|87134779|gb|ABD25521.1| type II secretion system protein [Novosphingobium aromaticivorans DSM 12444] Length = 324 Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 40/138 (28%), Gaps = 8/138 (5%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 M + L+ + YA P SK + R + K + Sbjct: 1 MTSIIQLLLMSTGLMVAMVLGYAALS---GPSASKEVNRRLQSVRFRHSESTLDKVEAQY 57 Query: 61 REAI---QKIELNHKAKIGNTKSIDSLISCSGLPISKQHY-YIGSCVIGFICGVLSLTLS 116 R+ + + + ++++ + +G + Y Y+ + I ++ + Sbjct: 58 RKTLAARKPKTMRPAGSSSRLEALELRLHRTGKGWTLSQYLYVSGGLAILIFLLV-YLRT 116 Query: 117 SSFFTFLCVSVSSALVFP 134 + L + P Sbjct: 117 GAPLLALGSGIFIGGGLP 134 >gi|85707699|ref|ZP_01038765.1| hypothetical protein NAP1_00650 [Erythrobacter sp. NAP1] gi|85689233|gb|EAQ29236.1| hypothetical protein NAP1_00650 [Erythrobacter sp. NAP1] Length = 323 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNH 71 LITV +F L A + + P K+Q R + + K + ++AI + Sbjct: 8 LITVVIFSALVAGYILLTGPAAGKAQKRRLEALRYRHSESTDAKVESQFKKAIAARKPKA 67 Query: 72 KAKIGN---TKSIDSLISCSGLPISKQHY-YIGSCVIGFICGVLSLTLSSSFFTFLCVSV 127 G+ T++++ + +G + Y Y+ +I + +L + + F + + Sbjct: 68 HKVAGSGSRTEALEVRLDRTGKGWTVSQYLYVTLGIILVVGVLLYIQTGAPFLSLAAGAF 127 Query: 128 SSALVFP 134 L P Sbjct: 128 V-GLGLP 133 >gi|307293453|ref|ZP_07573299.1| Type II secretion system F domain protein [Sphingobium chlorophenolicum L-1] gi|306881519|gb|EFN12735.1| Type II secretion system F domain protein [Sphingobium chlorophenolicum L-1] Length = 332 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 18/107 (16%) Query: 44 RADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKS----------------IDSLISC 87 +A + R + +AI +E + I N + + I Sbjct: 30 KARKRRMELIRGRHSDSADAI--LEARMRKAISNRPTGAESTMLVSLVPNPENLAKRIRM 87 Query: 88 SGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFP 134 +G + Y VI + L + + + + +++ L P Sbjct: 88 TGKKWTVSQYMTSCAVIFLVLCALLMLRGFAPLFAVMLGLAAGLGLP 134 >gi|259419064|ref|ZP_05742981.1| Cl- channel, voltage gated [Silicibacter sp. TrichCH4B] gi|259345286|gb|EEW57140.1| Cl- channel, voltage gated [Silicibacter sp. TrichCH4B] Length = 564 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Query: 96 HYYI---GSCVIGFICGVLSLTLSSSFFTF--LCVSVSSALVFPRFF 137 +Y+ ++G ICGV+++ L S F L +V SAL PR+ Sbjct: 250 QFYVELPAFLILGLICGVVAVVLMRSIFVTDRLGSAVQSALGVPRWL 296 >gi|115738584|ref|XP_001188871.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 165 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 28/60 (46%) Query: 14 TVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKA 73 ++S + A+ I+ +++ K+ D V + +RRK++ E ++I+ + Sbjct: 71 SISASGKVRAVNEKTISLHGRTTRELRKITHIDNVAAAESEERRKQIEERNKEIKERQRQ 130 >gi|257791502|ref|YP_003182108.1| type II secretion system protein [Eggerthella lenta DSM 2243] gi|257475399|gb|ACV55719.1| type II secretion system protein [Eggerthella lenta DSM 2243] Length = 295 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 16/139 (11%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQK 66 + LI S +Y +F + + P K + D + + R + Sbjct: 3 MMVALLIGCSAGFAVYLLFASRLFPSYRKIEKP-----PDSSVDANVSDRMAAAASFVSN 57 Query: 67 IELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS--------SS 118 + +A+ N + + I+ +GL + +Y S ++ + + L S +S Sbjct: 58 MLPLSRAQERN---LRNQIAAAGLNMKPSTFYGLSVILSLLGMIALLVFSPYIVGSDTTS 114 Query: 119 FFTFLCVSVSSALVFPRFF 137 F V V++ ++ PR F Sbjct: 115 LLLFNAVVVAAGILGPRGF 133 >gi|327272794|ref|XP_003221169.1| PREDICTED: thyroid transcription factor 1-associated protein 26-like [Anolis carolinensis] Length = 206 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 31/68 (45%) Query: 28 VINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISC 87 I + K++++ + ++A+R ++RKE RE Q++ K ++ S + Sbjct: 129 KIKTANQKAKEDYEKIKAERDRKKEAARQRKEEREKAQELYKKKKMEVYKILSKRTKKGQ 188 Query: 88 SGLPISKQ 95 L I + Sbjct: 189 PNLNIQME 196 >gi|195118443|ref|XP_002003746.1| GI21363 [Drosophila mojavensis] gi|193914321|gb|EDW13188.1| GI21363 [Drosophila mojavensis] Length = 7182 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 YA + + +S++++ A V++A+ +K RK L + K KAKI + + Sbjct: 6482 YAQLESALRNLNSENRNLAGVLKAELDRALEASKARKALENDLDKARQWLKAKISEVRKL 6541 Query: 82 D 82 Sbjct: 6542 P 6542 >gi|16905460|gb|AAL31361.1|L38852_1 signal peptidase 12kDa subunit [Homo sapiens] Length = 102 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 80 SIDSLISCSGLPISKQHY---YIGSCVIGFICGVLSLTLSSS-FFTFLCVSVSSALVFPR 135 S+ + + G +++Q + Y+ S ++GFI G ++ + + + S L P Sbjct: 7 SLPTQMDYKGQKLAEQMFQGIYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPP 66 Query: 136 F 136 + Sbjct: 67 W 67 >gi|145522792|ref|XP_001447240.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414740|emb|CAK79843.1| unnamed protein product [Paramecium tetraurelia] Length = 644 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 24/54 (44%) Query: 31 PGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL 84 + + + +A++ +R+K ++AI++ + KA+ ++ + Sbjct: 402 EKQERQKAEKERQKAEQDAIKEKQERQKAEQDAIKEKQERQKAEEERQRTEEKR 455 >gi|156355975|ref|XP_001623708.1| predicted protein [Nematostella vectensis] gi|156210433|gb|EDO31608.1| predicted protein [Nematostella vectensis] Length = 581 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 24/65 (36%) Query: 24 IFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDS 83 + + +++ ++ +R I K RK + + + +E + + T+ + Sbjct: 341 LLEEKLKQSEAEKEEMRAAQEEERRIKEELEKERKLIEQNRELLEKRVQEQEAETQRLQE 400 Query: 84 LISCS 88 + Sbjct: 401 EFERA 405 >gi|309358110|emb|CAS00285.1| hypothetical protein CBG_25923 [Caenorhabditis briggsae AF16] Length = 218 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 5 NSWFLVG--LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELRE 62 N ++G ++ +S CF+ A + + K K R K+RK Sbjct: 117 NPGIIIGGAVLLLSALCFMAACAMSFLTAKSQKPAVPVKRGNQIRKPARHVHKKRKRASS 176 Query: 63 AIQKIELNHKAKI 75 ++ K+E K K Sbjct: 177 SMDKMEKGQKKKE 189 >gi|148557758|ref|YP_001265340.1| type II secretion system protein [Sphingomonas wittichii RW1] gi|148502948|gb|ABQ71202.1| type II secretion system protein [Sphingomonas wittichii RW1] Length = 324 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%) Query: 84 LISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALVFPR 135 I +G + + YY GS + +L + + + L V ++ L PR Sbjct: 84 QIEAAGKKWTVRQYYTGSGFAFAVPMLLLMLVGLPAWMALIVGAAAGLGLPR 135 >gi|158285756|ref|XP_308445.4| AGAP007387-PA [Anopheles gambiae str. PEST] gi|157020146|gb|EAA04266.4| AGAP007387-PA [Anopheles gambiae str. PEST] Length = 449 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 23/53 (43%) Query: 36 SQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCS 88 + + ++ + + ++L ++KIE K + T+ + LIS + Sbjct: 216 ERRRKEQLKKLFDRTSKQVEEEQQLLNELKKIEARKKERERKTQDLQKLISQA 268 >gi|292491526|ref|YP_003526965.1| type II secretion system protein [Nitrosococcus halophilus Nc4] gi|291580121|gb|ADE14578.1| type II secretion system protein [Nitrosococcus halophilus Nc4] Length = 323 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 48/129 (37%), Gaps = 3/129 (2%) Query: 5 NSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRA--DRVIPTANTKRRKELRE 62 + + ++ ++VF AI +++ + ++ + + P A + R++ Sbjct: 4 DQLIFLIMVFLAVFLLATAIIVPTFGTSAQAAKNLRRRIQGAIEELDPAAISLLREKSFH 63 Query: 63 AIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTF 122 + +E + + LI SG + + + +G G+L L+ S Sbjct: 64 KLSPLE-RWIEGLPGMVRLSLLIKQSGRETAAYRVVLFAFSLGMGLGLLVWVLARSPLLG 122 Query: 123 LCVSVSSAL 131 V+ S + Sbjct: 123 FLVAFVSFI 131 >gi|258516254|ref|YP_003192476.1| phosphodiesterase [Desulfotomaculum acetoxidans DSM 771] gi|257779959|gb|ACV63853.1| RNA binding metal dependent phosphohydrolase [Desulfotomaculum acetoxidans DSM 771] Length = 511 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 4 VNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKR------R 57 + + V F Y I V+ + +++ K + + + KR + Sbjct: 2 FENLLIALPAAVVAFIIGYFIRRYVVEAKIATAEEEVKRIIDNAEKTAESLKREAILEAK 61 Query: 58 KELREAIQKIELNHKAKIGNTKSIDSLISC 87 +E+ + ++E +K + + ++ + Sbjct: 62 EEVLKQRNEVERENKERRSELQRLERRLVQ 91 >gi|118091433|ref|XP_421068.2| PREDICTED: similar to class I INCENP protein [Gallus gallus] Length = 495 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTAN-TKRRKELREAIQKIELNHKAKIGNTKSIDS 83 ++ +++ Q KV R KR + LR+A+Q E + + K ++ Sbjct: 169 LESLRKKQEAEEQRKKKVEEEKRRRQAEMKQKREERLRKALQARERVEQMEEEKKKRMEQ 228 Query: 84 LISCSGLPISKQH 96 I S + Sbjct: 229 KILQSDEKVRLSQ 241 >gi|85076201|ref|XP_955894.1| hypothetical protein NCU03330 [Neurospora crassa OR74A] gi|28881167|emb|CAD70349.1| conserved hypothetical protein [Neurospora crassa] gi|28916922|gb|EAA26658.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1137 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%) Query: 33 DSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL 84 D AK V +R + A KRR+E+++ I+++ K + ++ Sbjct: 1051 DEVEARRAKAVDLEREMSLAREKRREEMQQQIKRLAEAQAPKTAGSPAVADR 1102 >gi|295704070|ref|YP_003597145.1| putative ABC transporter ATP-binding protein [Bacillus megaterium DSM 319] gi|294801729|gb|ADF38795.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium DSM 319] Length = 632 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 2/92 (2%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL--REAI 64 G +S++ Y AKV P KRR ++ Sbjct: 508 LVFEGEGNISIYFGAYTDQLEEAMKKKQAMVQQAKVKEEKPKQPEKTKKRRLTYKEQKEW 567 Query: 65 QKIELNHKAKIGNTKSIDSLISCSGLPISKQH 96 ++IE N AK + + S I G +K H Sbjct: 568 EEIEGNIAAKEEEIERLTSEIEQVGSDYTKAH 599 >gi|195385902|ref|XP_002051643.1| GJ11158 [Drosophila virilis] gi|194148100|gb|EDW63798.1| GJ11158 [Drosophila virilis] Length = 8387 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 YA + + +S++++ + V++A+ +K RK L + K KAKI + + Sbjct: 7004 YAQLESALRNLNSENRNLSGVLKAELDRALEASKARKALENDLDKARQWLKAKISEVRKL 7063 Query: 82 D 82 Sbjct: 7064 P 7064 >gi|221128363|ref|XP_002164116.1| PREDICTED: similar to coiled-coil domain containing 25, partial [Hydra magnipapillata] Length = 158 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELRE-AIQKIELNHKAKIGNTKSIDS 83 N +N + + N +++R DR +R K+L E A+ K++ K + N S S Sbjct: 78 IINRLNKTKVEREINYRLLREDRDREERAKERAKQLEEKALNKLKEEQKREQENLTSYAS 137 Query: 84 LISCSGL 90 L+ S + Sbjct: 138 LMDESNM 144 >gi|194760671|ref|XP_001962561.1| GF14378 [Drosophila ananassae] gi|190616258|gb|EDV31782.1| GF14378 [Drosophila ananassae] Length = 8003 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 YA + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6620 YAQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 6679 Query: 82 D 82 Sbjct: 6680 P 6680 >gi|326426627|gb|EGD72197.1| hypothetical protein PTSG_00219 [Salpingoeca sp. ATCC 50818] Length = 2117 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 25/63 (39%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL 84 + + + + + A+ P +RRK RE ++ + + K +SI + Sbjct: 509 LRKRRQQAEREHKAEKQRLLAEGQNPEEVFRRRKLERERAKQQQRAQREKEKQEQSIAAR 568 Query: 85 ISC 87 I+ Sbjct: 569 IAQ 571 >gi|322785793|gb|EFZ12413.1| hypothetical protein SINV_12697 [Solenopsis invicta] Length = 313 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRK---ELREAIQKIELNHKAKI 75 S S++ KV++ +R + TK RK +L++ + + KI Sbjct: 200 KKRGRSKSDSKERKKVIKTERRVIVDITKDRKVREQLKDKRRDFDRKRDEKI 251 >gi|156406663|ref|XP_001641164.1| predicted protein [Nematostella vectensis] gi|156228302|gb|EDO49101.1| predicted protein [Nematostella vectensis] Length = 1107 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 34/115 (29%), Gaps = 7/115 (6%) Query: 15 VSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTA-NTKRRKELREAIQKIELN--- 70 VS + + ++ + K++KE + + +++ + Sbjct: 889 VSQANIRIGLLEKRLENASKEADARVEAANKKMEQAMEELQKKKKEYEDTMDELQADIDT 948 Query: 71 -HKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLC 124 K K K +D+ + L +H S + + G + S Sbjct: 949 LEKEKEDMKKRLDAYSKRTLLADLARHTSASSGIAAVVAG--NPLKGGSPLRAAG 1001 >gi|160935091|ref|ZP_02082477.1| hypothetical protein CLOLEP_03967 [Clostridium leptum DSM 753] gi|156866544|gb|EDO59916.1| hypothetical protein CLOLEP_03967 [Clostridium leptum DSM 753] Length = 521 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 34 SKSQDNAKVVRADRVIPTANTKRR-----KELREAIQKIELNHKAKIGNTKSIDSLISCS 88 + + A+ ADR +RR + L + ++ +E +A TK ID ++ + Sbjct: 75 HRQRLEAEREIADRRKDVQRQERRIQQKEETLDKKLEHLEAKEEAINAKTKKIDERLAEA 134 Query: 89 GLPISKQHYYIGSCVIGF 106 + K + + + GF Sbjct: 135 E-TVKKSQFEMLERISGF 151 >gi|195034088|ref|XP_001988823.1| GH10367 [Drosophila grimshawi] gi|193904823|gb|EDW03690.1| GH10367 [Drosophila grimshawi] Length = 8390 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 YA + + +S++++ + V++A+ +K RK L + K K KI + + Sbjct: 7007 YAQLESALRNLNSENRNLSGVLKAELDRALEASKARKALENDLDKARQWLKTKISEVRKL 7066 Query: 82 D 82 Sbjct: 7067 P 7067 >gi|260827853|ref|XP_002608878.1| hypothetical protein BRAFLDRAFT_129938 [Branchiostoma floridae] gi|229294232|gb|EEN64888.1| hypothetical protein BRAFLDRAFT_129938 [Branchiostoma floridae] Length = 612 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 13/76 (17%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIP-------------TANTKRRKELREAIQKIELNH 71 Y + SK ++ +V +R+ +RRKEL ++ ++ Sbjct: 197 LYEEMEVQLSKEREKIRVEVEERMRVELARKLEEKDDQLRELNQRRKELELMLKDLDHRE 256 Query: 72 KAKIGNTKSIDSLISC 87 K K + ++ +I+ Sbjct: 257 KEKDKRYQELEEMIAE 272 >gi|126336629|ref|XP_001380278.1| PREDICTED: similar to signal peptidase complex subunit 1 homolog (S. cerevisiae) [Monodelphis domestica] Length = 573 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 39 NAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSGLPISKQHY- 97 + +V + R P+ + KR + ++Q+ + S+ + + G +++Q + Sbjct: 440 PSSLVSSSRD-PSGSPKRSTSV--SLQRRGPPKAIILDGLSSLPTQMDYKGQKLAEQMFQ 496 Query: 98 --YIGSCVIGFICGVLSLTLSSS-FFTFLCVSVSSALVFPRF 136 + S VIGFI G ++ + + + S L P + Sbjct: 497 GIILFSAVIGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPW 538 >gi|295700366|ref|YP_003608259.1| type II secretion system F domain protein [Burkholderia sp. CCGE1002] gi|295439579|gb|ADG18748.1| Type II secretion system F domain protein [Burkholderia sp. CCGE1002] Length = 325 Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 37/121 (30%) Query: 6 SWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQ 65 S L+ V +Y + + P + + V A + K A Sbjct: 8 SIILLFAAVVLATGGVYEYWNSRHGPVARRVDSRIRAVSAGGPMSRQRLSILKTRTMAES 67 Query: 66 KIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCV 125 + +I ++D + SGL S ++ V+ ++ +L + Sbjct: 68 AVLARLLLRIPRVHALDLFLQQSGLSWSVGRFFGTCAVLPPFVLIVGASLRVPWVFTAGA 127 Query: 126 S 126 + Sbjct: 128 A 128 >gi|198434770|ref|XP_002132158.1| PREDICTED: similar to melanoma inhibitory activity family, member 3 [Ciona intestinalis] Length = 1608 Score = 34.6 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 23/62 (37%) Query: 27 NVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLIS 86 + ++QD K + K+RK + E ++ + K + + ++ + Sbjct: 976 KSLEQKQKETQDAEKKAAQLKSEMKDLVKQRKMVEENLKDSQDRLKREEKKKQELEQNLQ 1035 Query: 87 CS 88 S Sbjct: 1036 TS 1037 >gi|300692335|ref|YP_003753330.1| Tad secretion system, pilus assembly protein [Ralstonia solanacearum PSI07] gi|299079395|emb|CBJ52066.1| Tad secretion system, pilus assembly protein [Ralstonia solanacearum PSI07] Length = 325 Score = 34.6 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 43/123 (34%), Gaps = 7/123 (5%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVR----ADRVIPTANTKRRKELREAIQKI 67 I V + + +++N + +K + + + + T+ K+R L E+ Sbjct: 13 FIAVVLGAIGFYLWWNSRHSPTAKRLNQRLEMALFSLSGKDAQTSILKQR-VLAESTDIA 71 Query: 68 ELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSV 127 L + N + + SGL S + + + + ++ + L ++ Sbjct: 72 RLLQRIPHVNALDMT--LLQSGLDWSVSRFLTLTLALPVVACTVAALFAPPLVLLLGIAA 129 Query: 128 SSA 130 + Sbjct: 130 LAG 132 >gi|254496627|ref|ZP_05109492.1| hypothetical protein LDG_1061 [Legionella drancourtii LLAP12] gi|254354149|gb|EET12819.1| hypothetical protein LDG_1061 [Legionella drancourtii LLAP12] Length = 433 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 26/72 (36%) Query: 23 AIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSID 82 + ++Q + A R +RRKE EA ++ E + + D Sbjct: 234 FVIEFDKTKEQEEAQRRKEQEEAQRRKEQEEAQRRKEQEEAQRRKEQEDSLQRRKVQEED 293 Query: 83 SLISCSGLPISK 94 + + GL +K Sbjct: 294 ARRAQIGLMFAK 305 >gi|326920284|ref|XP_003206404.1| PREDICTED: inner centromere protein A-like [Meleagris gallopavo] Length = 634 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTAN-TKRRKELREAIQKIELNHKAKIGNTKSIDS 83 ++ +++ Q KV R KR + LR+A+Q E + + K ++ Sbjct: 149 LESLRKKQEAEEQRKKKVEEEKRRRQAEMKQKREERLRKALQARERVEQMEEEKKKRMEQ 208 Query: 84 LISCSGLPISKQH 96 S + Sbjct: 209 KFLQSDEKVRLSQ 221 >gi|302391032|ref|YP_003826852.1| type II secretion system F domain protein [Acetohalobium arabaticum DSM 5501] gi|302203109|gb|ADL11787.1| Type II secretion system F domain protein [Acetohalobium arabaticum DSM 5501] Length = 327 Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 43/111 (38%), Gaps = 1/111 (0%) Query: 7 WFLVGLITVSVFCFLYAIFYNVINPGDS-KSQDNAKVVRADRVIPTANTKRRKELREAIQ 65 + +V V + L A V D + + ++ + + + RK L++ + Sbjct: 10 FLVVTTAVVVSYKLLTAREAKVKERLDKYSAIEEGRIGQNTALDREEDVGERKSLKKRLL 69 Query: 66 KIELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLS 116 + S+++ + + LP+ + I + V I G++ + +S Sbjct: 70 EKFNQFLTSFSLVASLEAELQKTDLPLKVSEFIIINLVSCVILGLIGILVS 120 >gi|71278760|ref|YP_268468.1| putative tolA protein [Colwellia psychrerythraea 34H] gi|71144500|gb|AAZ24973.1| putative tolA protein [Colwellia psychrerythraea 34H] Length = 304 Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 22 YAIFYNVINPGDSKSQD-NAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNT 78 + N I +D K ++A + KRR + + I+K+E K K Sbjct: 56 FEQAVNKIKRQKINERDAEKKRLKAVEKRASDAKKRRVQEQARIKKLEKQRKQKEQEK 113 >gi|238922904|ref|YP_002936417.1| hypothetical protein EUBREC_0492 [Eubacterium rectale ATCC 33656] gi|238874576|gb|ACR74283.1| Hypothetical protein EUBREC_0492 [Eubacterium rectale ATCC 33656] Length = 616 Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 21 LYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKS 80 +Y + ++ + + + +R A +RRK+L+E ++ EL + I +KS Sbjct: 44 IYGKEQPYLQWTENGKSKSKYIKKNEREEIFAGVERRKQLQEELK--ELKQHSSIDPSKS 101 Query: 81 ID 82 D Sbjct: 102 TD 103 >gi|291528741|emb|CBK94327.1| hypothetical protein ERE_24690 [Eubacterium rectale M104/1] Length = 599 Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 21 LYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKS 80 +Y + ++ + + + +R A +RRK+L+E ++ EL + I +KS Sbjct: 27 IYGKEQPYLQWTENGKSKSKYIKKNEREEIFAGVERRKQLQEELK--ELKQHSSIDPSKS 84 Query: 81 ID 82 D Sbjct: 85 TD 86 >gi|291523794|emb|CBK89381.1| hypothetical protein EUR_01370 [Eubacterium rectale DSM 17629] Length = 599 Score = 34.6 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 21 LYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKS 80 +Y + ++ + + + +R A +RRK+L+E ++ EL + I +KS Sbjct: 27 IYGKEQPYLQWTENGKSKSKYIKKNEREEIFAGVERRKQLQEELK--ELKQHSSIDPSKS 84 Query: 81 ID 82 D Sbjct: 85 TD 86 >gi|123414924|ref|XP_001304583.1| hypothetical protein [Trichomonas vaginalis G3] gi|121886046|gb|EAX91653.1| hypothetical protein TVAG_323680 [Trichomonas vaginalis G3] Length = 813 Score = 34.6 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 19/59 (32%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL 84 + +RA+R KR + ++E I+K E + + + Sbjct: 480 EKALQEKIDMENKRFLALRAERRRLAEKQKRERIVQEQIKKQEEFERRRQETAAKLRKQ 538 >gi|254780721|ref|YP_003065134.1| pilus component protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040398|gb|ACT57194.1| pilus component protein [Candidatus Liberibacter asiaticus str. psy62] Length = 329 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 +FD + VS+F +YA+ + G+ + K V +R I RK+ Sbjct: 8 LFDATELAVAITTAVSIFSLIYAVVIPSLGSGE--LEKRMKSVAVEREIL------RKQQ 59 Query: 61 REAIQKIELNHKAKIGNTKSIDSLISCSGLP 91 ++QK + + + ++KS+ + + L Sbjct: 60 ITSLQKDSASSRLRTRDSKSLRNFVKKLNLK 90 >gi|320544548|ref|NP_001188697.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster] gi|318068312|gb|ADV36947.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster] Length = 11999 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6640 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 6699 Query: 82 D 82 Sbjct: 6700 P 6700 >gi|320544546|ref|NP_001188696.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster] gi|318068311|gb|ADV36946.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster] Length = 11986 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6640 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 6699 Query: 82 D 82 Sbjct: 6700 P 6700 >gi|195576698|ref|XP_002078212.1| GD23326 [Drosophila simulans] gi|194190221|gb|EDX03797.1| GD23326 [Drosophila simulans] Length = 2547 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 469 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 528 Query: 82 D 82 Sbjct: 529 P 529 >gi|195342674|ref|XP_002037925.1| GM18531 [Drosophila sechellia] gi|194132775|gb|EDW54343.1| GM18531 [Drosophila sechellia] Length = 8290 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6907 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 6966 Query: 82 D 82 Sbjct: 6967 P 6967 >gi|320544542|ref|NP_001188694.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster] gi|318068309|gb|ADV36944.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster] Length = 12345 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6999 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 7058 Query: 82 D 82 Sbjct: 7059 P 7059 >gi|320544538|ref|NP_001188692.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster] gi|318068307|gb|ADV36942.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster] Length = 8382 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 28/61 (45%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++++++ + V++A+ +K RK L + K K KI + + Sbjct: 6999 YSQLESALRNLNTENRNLSGVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 7058 Query: 82 D 82 Sbjct: 7059 P 7059 >gi|194856553|ref|XP_001968775.1| GG25055 [Drosophila erecta] gi|190660642|gb|EDV57834.1| GG25055 [Drosophila erecta] Length = 8391 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 27/61 (44%) Query: 22 YAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSI 81 Y+ + + ++ +++ + V++A+ +K RK L + K K KI + + Sbjct: 7008 YSQLESALRNLNTDNRNLSAVLKAELDRALEASKARKSLENDLDKARQWLKTKISEVRKL 7067 Query: 82 D 82 Sbjct: 7068 P 7068 >gi|325114110|emb|CBZ49668.1| hypothetical protein NCLIV_001560 [Neospora caninum Liverpool] Length = 1126 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 24/69 (34%) Query: 29 INPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCS 88 + K + A A R + RK + ++KI + + + + L+ Sbjct: 309 LRGEREKERKPATRTPAGRSAASDAPPSRKRSAQEVKKITESAEERQRKETEDELLVPQL 368 Query: 89 GLPISKQHY 97 G+ + + Sbjct: 369 GVSPGDRRF 377 >gi|312371680|gb|EFR19804.1| hypothetical protein AND_21783 [Anopheles darlingi] Length = 557 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%) Query: 36 SQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCS 88 + + ++ T + + L ++KIE K + T+ + LIS + Sbjct: 215 ERRRKEQLKKLFDRTTKQVEEEQMLLNELKKIEARKKERERKTQDLQKLISQA 267 >gi|219126164|ref|XP_002183333.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405089|gb|EEC45033.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 516 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%) Query: 32 GDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 S+ + + A+R + KR+K+ E +++ + + K KSI LI Sbjct: 262 ASSQKEKKQQKRAANRRSAQLSRKRKKQFVEELKEENDDLRRKEQILKSIPDLI 315 >gi|85074599|ref|XP_960766.1| hypothetical protein NCU09676 [Neurospora crassa OR74A] gi|28922288|gb|EAA31530.1| predicted protein [Neurospora crassa OR74A] gi|28949976|emb|CAD70737.1| conserved hypothetical protein [Neurospora crassa] Length = 425 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Query: 6 SWFLVGLITVSVFCFLYAI-FYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAI 64 S+ L LI+ F + ++ + + + K+ R +R E ++ Sbjct: 15 SFILATLISTIAGTFTTGVNLFDRVGEA-RRQRRQRKMDRGQNRRIKELEQRLDEAVKSK 73 Query: 65 QKIELNHKAKIGNTK 79 ++E ++ N + Sbjct: 74 SEVEERQNSRNRNQR 88 >gi|170700845|ref|ZP_02891834.1| type II secretion system protein [Burkholderia ambifaria IOP40-10] gi|170134253|gb|EDT02592.1| type II secretion system protein [Burkholderia ambifaria IOP40-10] Length = 325 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 43/124 (34%), Gaps = 2/124 (1%) Query: 8 FLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTK-RRKELREAIQK 66 L + V +Y + + + + + A + +K + + + Sbjct: 10 ILTFVAVVLAIEGVYQWWNARHGAAARRIESRLRAMSAGGSVQQERLSILKKRMLDESKP 69 Query: 67 IELNHKAKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVS 126 + ++ +++D ++ SGL + + S V+ ++ T L ++ Sbjct: 70 FD-RLLMRVPRIQALDLVLQQSGLDWTVAKLVVISAVLAVTAALVLTVSPLPLITVLPIA 128 Query: 127 VSSA 130 + +A Sbjct: 129 LLTA 132 >gi|270003442|gb|EEZ99889.1| hypothetical protein TcasGA2_TC002673 [Tribolium castaneum] Length = 966 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 22/45 (48%) Query: 41 KVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 KVV R P+ +R K+ +A++++E + + + L+ Sbjct: 450 KVVTPIRAPPSDAVQRAKDAADALRELEHRRDTDHRDLQELRDLL 494 >gi|189235646|ref|XP_968349.2| PREDICTED: similar to AGAP001683-PA [Tribolium castaneum] Length = 893 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 22/45 (48%) Query: 41 KVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 KVV R P+ +R K+ +A++++E + + + L+ Sbjct: 387 KVVTPIRAPPSDAVQRAKDAADALRELEHRRDTDHRDLQELRDLL 431 >gi|66801013|ref|XP_629432.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60462823|gb|EAL61023.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 1221 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 25 FYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKA--KIGNTKSID 82 N IN D + + + + R+ + R++ R+ +Q++E N + + KS + Sbjct: 113 IQNGINRKDETEEARNERLESIRLEKERLKQIREQQRKQLQELEKNQRQQLQEDKEKSAN 172 Query: 83 SLISC 87 + + Sbjct: 173 ARLKY 177 >gi|325118771|emb|CBZ54322.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 628 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%) Query: 73 AKIGNTKSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSALV 132 K + ++ + +G +S + S V I G+L + F + + L+ Sbjct: 512 QKTSDCEAASISLIQTGKNLSSKISVGVSGVAALIFGILGVMSGGISMLFPALFIVGGLL 571 Query: 133 F 133 Sbjct: 572 L 572 >gi|99080534|ref|YP_612688.1| Cl- channel, voltage gated [Ruegeria sp. TM1040] gi|99036814|gb|ABF63426.1| Cl- channel voltage gated [Ruegeria sp. TM1040] Length = 564 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Query: 96 HYYI---GSCVIGFICGVLSLTLSSSFFTF--LCVSVSSALVFPRFF 137 +Y+ ++G ICGV+++ L S F + +V SAL PR+ Sbjct: 250 QFYVELPAFLMLGLICGVVAVVLMHSIFLADRVGTAVQSALGMPRWL 296 >gi|229159365|ref|ZP_04287386.1| Molybdenum ABC transporter, periplasmic molybdate-binding protein [Bacillus cereus R309803] gi|228624116|gb|EEK80921.1| Molybdenum ABC transporter, periplasmic molybdate-binding protein [Bacillus cereus R309803] Length = 268 Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 14/79 (17%) Query: 1 MFDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKEL 60 + + + L L+ SV C GD K + AK +A + +A L Sbjct: 6 LRSIGALILSFLLIFSVAC----------TSGDKKEKSTAKEEKAVELTISAAA----SL 51 Query: 61 REAIQKIELNHKAKIGNTK 79 ++A+++IE +K K N K Sbjct: 52 QDALKEIETKYKEKEPNIK 70 >gi|307177161|gb|EFN66394.1| Rab GTPase-binding effector protein 1 [Camponotus floridanus] Length = 621 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDS-- 83 ++ + + Q+ K + T +R K L++ + E K + ++S+ Sbjct: 473 EKKLDQLEKQLQEVEKEKKDAESAVTELQQRVKSLQQELDTSEAVQKDFVRLSQSLQVQL 532 Query: 84 -LISCSGLPISKQH 96 I +G + QH Sbjct: 533 ERIRQAGSEVRWQH 546 >gi|149190330|ref|ZP_01868603.1| aerobic respiration control sensor protein ArcB [Vibrio shilonii AK1] gi|148835819|gb|EDL52783.1| aerobic respiration control sensor protein ArcB [Vibrio shilonii AK1] Length = 783 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 1/84 (1%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANT-KRRKEL 60 D+ GL+ + ++ + + + ++ R K ++ + Sbjct: 53 IDIVRSVFFGLLITPWAVYFLSVVVDQLEESRQRLSKMVSKLKDMRSRDQDLNHKLQQNI 112 Query: 61 REAIQKIELNHKAKIGNTKSIDSL 84 R+ Q+IE KA+ +++ L Sbjct: 113 RKLNQEIEERQKAEEAREEAMKDL 136 >gi|308176985|ref|YP_003916391.1| type II secretion system protein F [Arthrobacter arilaitensis Re117] gi|307744448|emb|CBT75420.1| putative type II secretion system protein F [Arthrobacter arilaitensis Re117] Length = 283 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 73 AKIGNTKSIDSLISCSGL-PISKQHYYIGSCVIGFICGVLSLTLSSSFFTFLCVSVSSAL 131 + +I + + +G+ ++ + + V G +++L L++S+ L + + Sbjct: 27 KSRNRSSAIKNALLHAGMGNLAPSKFIVICVVCGITFTLITLALTASWLFALVFCIFGSF 86 >gi|289670369|ref|ZP_06491444.1| two-component system sensor protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 1057 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 10 VGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIEL 69 +GL + L A ++ +S++ RV ++R+ L+++ +E+ Sbjct: 262 IGLALRT--ALLRAQLVTLLEETQRQSEELQTQQEELRVANEELEEQRRSLQQSQSDLEV 319 Query: 70 NHKAKIGNTKSIDSL 84 ++ Sbjct: 320 QQAELEQTNVQLEER 334 >gi|118385165|ref|XP_001025720.1| hypothetical protein TTHERM_00929570 [Tetrahymena thermophila] gi|89307487|gb|EAS05475.1| hypothetical protein TTHERM_00929570 [Tetrahymena thermophila SB210] Length = 206 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 10/110 (9%) Query: 2 FDVNSWFLVGLITVSVFCFLYAIFYNVINPGDS-------KSQDNAKVVRADRVIPTANT 54 FD+ ++ +G I ++ +AIFY I + K + ++ + Sbjct: 71 FDLVAFMKLGAILLTPGFIFFAIFYKFIKKSEQNNQEYFDKLEKTKGTETSEADKASKMK 130 Query: 55 KRRKELREAIQKIELNHKAKIGNTK---SIDSLISCSGLPISKQHYYIGS 101 + K++++++QK + + G +K S L+ + S Q +I + Sbjct: 131 ESLKKIQKSMQKDKSSESQLQGKSKFKYSTSFLLPQTPFSSSVQKPFIFN 180 >gi|310830507|ref|YP_003965608.1| hypothetical protein PPSC2_p0147 [Paenibacillus polymyxa SC2] gi|309249974|gb|ADO59540.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 313 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 54 TKRRKELREAIQKIELNHK--------AKIGNTKSIDSLISCSGLPISKQHYYIGSCVIG 105 KR+++ + +++ L + + +I++L +G P++ Y + S Sbjct: 30 EKRKEQSKNLLRENVLKQRIEQIAEGRVRYSKRYAIETLCMQAGFPLTYAEYLMISVASA 89 Query: 106 F-ICGVLSLTLSSSFFTFLCVSVSSALVFPRFF 137 + + + +++ + + + P+ F Sbjct: 90 LIVAIFVGMVMNNPILGI--IFLIVGYMIPKQF 120 >gi|116873031|ref|YP_849812.1| transposase, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116873602|ref|YP_850383.1| transposase, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741909|emb|CAK21033.1| transposase, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742480|emb|CAK21604.1| transposase, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 183 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 46 DRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSL 84 R KR+K +++ + ++E K + L Sbjct: 116 GRPPKMDAKKRKKSVQDNLTQLEKLEKENRMLKIELSYL 154 >gi|242242041|ref|ZP_04796486.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] gi|242234515|gb|EES36827.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] Length = 231 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 Y Q+ + + D+ + KR KE + ++ E N K +I + K Sbjct: 92 YIEKKGEKLAKQNRKEADKMDKKLQKNIEKRHKEEQ---KQREANQKQRIKDMKKSQKYE 148 Query: 86 SCSGLP 91 GL Sbjct: 149 EQVGLT 154 >gi|123475590|ref|XP_001320972.1| hypothetical protein [Trichomonas vaginalis G3] gi|121903788|gb|EAY08749.1| hypothetical protein TVAG_251750 [Trichomonas vaginalis G3] Length = 1197 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 +N I+ DSK + K + + R K L I++IE K KI NT +++ I Sbjct: 474 FNKISENDSKISELNKQISNLSSKLNESESRNKSLENKIKEIES--KNKINNTSDLENKI 531 >gi|251810109|ref|ZP_04824582.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|293368134|ref|ZP_06614766.1| hypothetical protein HMPREF0794_2048 [Staphylococcus epidermidis M23864:W2(grey)] gi|251806453|gb|EES59110.1| conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] gi|291317824|gb|EFE58238.1| hypothetical protein HMPREF0794_2048 [Staphylococcus epidermidis M23864:W2(grey)] Length = 231 Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 Y Q+ + + D+ + KR KE + ++ E N K +I + K Sbjct: 92 YIEKKGEKLAKQNRKEADKMDKKLQKNIEKRHKEEQ---KQREANQKQRIKDMKKTQKYE 148 Query: 86 SCSGLP 91 GL Sbjct: 149 EQVGLT 154 >gi|326388861|ref|ZP_08210443.1| type II secretion system protein [Novosphingobium nitrogenifigens DSM 19370] gi|326206461|gb|EGD57296.1| type II secretion system protein [Novosphingobium nitrogenifigens DSM 19370] Length = 323 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 7/130 (5%) Query: 12 LITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNH 71 L+ + + +A + P ++ R + K + R+A+ + Sbjct: 8 LMAIGLTVAAWAGITLFMGPNPARESSRRLQAVKLRHSESTTDKVEAQYRKALAARKPKA 67 Query: 72 KAKIGNT---KSIDSLISCSGLPISKQHYYIGSCVIGFICGVLSLTL--SSSFFTFLCVS 126 G++ +++ + +G + Y S +G + S S L + Sbjct: 68 YKLAGSSSRLEALSLRLDRTGRGWTISQYLYAS--LGLVILFGGFVWIKSGSLVLGLALG 125 Query: 127 VSSALVFPRF 136 ++ P F Sbjct: 126 IAIGAGLPHF 135 >gi|71421983|ref|XP_811977.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876703|gb|EAN90126.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1363 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%) Query: 30 NPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLISCSG 89 N S K +AD+ A+ R +L EA+Q+ E H+ ++ + +L SG Sbjct: 377 NSSTSTPLTARKGEKADQDTVRASQNLRVQLDEALQQREEVHRELERTSEELAALREQSG 436 Query: 90 LP 91 + Sbjct: 437 VD 438 >gi|319401249|gb|EFV89461.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] Length = 226 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 Y Q+ + + D+ + KR KE + ++ E N K +I + K Sbjct: 87 YIEKKGEKLAKQNRKEADKMDKKLQKNIEKRHKEEQ---KQREANQKQRIKDMKKSQKYE 143 Query: 86 SCSGLP 91 GL Sbjct: 144 EQVGLT 149 >gi|289583130|ref|YP_003481596.1| ribonuclease BN [Natrialba magadii ATCC 43099] gi|289532683|gb|ADD07034.1| ribonuclease BN [Natrialba magadii ATCC 43099] Length = 378 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 6 SWFLVGLITVSVFCFLYAIFYNVINPGDSKSQDNAKVVRADRVIPTANTKR-RKELREAI 64 +W G + + V + A+ + P D +S + DR +T+R R+ LR I Sbjct: 238 TWLYFGGLILLVGAVINAVGTGRLEPTDEESLSQTSIAATDREAFVDDTQRERERLRNRI 297 Query: 65 QKIELNHKAKIGNTKSIDSL 84 +++E + + S Sbjct: 298 ERLERERAQLRNDLAAQRSR 317 >gi|27467370|ref|NP_764007.1| hypothetical protein SE0452 [Staphylococcus epidermidis ATCC 12228] gi|57866269|ref|YP_187933.1| hypothetical protein SERP0337 [Staphylococcus epidermidis RP62A] gi|282874857|ref|ZP_06283732.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|27314913|gb|AAO04049.1|AE016745_148 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57636927|gb|AAW53715.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|281296185|gb|EFA88704.1| conserved hypothetical protein [Staphylococcus epidermidis SK135] gi|329733292|gb|EGG69627.1| hypothetical protein SEVCU045_0175 [Staphylococcus epidermidis VCU045] Length = 226 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 26 YNVINPGDSKSQDNAKVVRADRVIPTANTKRRKELREAIQKIELNHKAKIGNTKSIDSLI 85 Y Q+ + + D+ + KR KE + ++ E N K +I + K Sbjct: 87 YIEKKGEKLAKQNRKEADKMDKKLQKNIEKRHKEEQ---KQREANQKQRIKDMKKTQKYE 143 Query: 86 SCSGLP 91 GL Sbjct: 144 EQVGLT 149 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.136 0.320 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,918,080,105 Number of Sequences: 14124377 Number of extensions: 57176824 Number of successful extensions: 507168 Number of sequences better than 10.0: 657 Number of HSP's better than 10.0 without gapping: 330 Number of HSP's successfully gapped in prelim test: 379 Number of HSP's that attempted gapping in prelim test: 505339 Number of HSP's gapped (non-prelim): 1936 length of query: 137 length of database: 4,842,793,630 effective HSP length: 102 effective length of query: 35 effective length of database: 3,402,107,176 effective search space: 119073751160 effective search space used: 119073751160 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 75 (33.5 bits)