HHsearch alignment for GI: 254780724 and conserved domain: COG1123
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].
Probab=95.66 E-value=0.056 Score=32.45 Aligned_cols=121 Identities=18% Similarity=0.268 Sum_probs=57.3
Q ss_pred CCCCCEEEEEC--------CCCEEEEECCEEEECCCC---CCCHHHHHHHHHHHHHHH----CCCCCC--------CCCE
Q ss_conf 83321799856--------991899827838971762---079899999999999980----981243--------3877
Q gi|254780724|r 133 RDDIADIMVNG--------SNKVFIEVNGKTVETGIN---FRDNEQLLSVCQRIVNQV----GRRVDE--------SSPI 189 (483)
Q Consensus 133 D~~VsdI~ing--------~~~I~ve~~G~~~~~~~~---f~~~~~l~~~i~rla~~~----g~~i~~--------~~P~ 189 (483)
T Consensus 203 e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p~h--pYT~~Ll~a~p~~~~~~~~~~~~~~~~~~~~l 280 (539)
T COG1123 203 ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNPQH--PYTRGLLAAVPRLGDEKIIRLPRRGPLRAEPL 280 (539)
T ss_pred HCCCEEEEECCCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCC--CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 7094899986899999975376999988788874689999726688--65688884188766544344333455556760
Q ss_pred EEEE-----ECC--CCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC-CCCEEEECCC
Q ss_conf 8798-----237--62034531553578816888405765466788865069988999998986225-8848998188
Q gi|254780724|r 190 CDAR-----LLD--GSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRI-RCNVLISGGT 259 (483)
Q Consensus 190 ~d~~-----lpd--g~Ri~~~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~-~~nilVsG~T 259 (483)
T Consensus 281 l~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~--GE~lgl--VGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~ 354 (539)
T COG1123 281 LSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLRE--GETLGL--VGESGSGKSTLARILAGLLPPSSGSIIFDGQD 354 (539)
T ss_pred EEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECC--CCEEEE--ECCCCCCHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 576420446314655444556640123012457638--878999--88999998999999948778888449992765