HHsearch alignment for GI: 254780724 and conserved domain: COG1126
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].
Probab=97.48 E-value=0.001 Score=44.58 Aligned_cols=114 Identities=25% Similarity=0.306 Sum_probs=67.7
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHH--------------CCCCCCEEEEEEECCCC---
Q ss_conf 9862258848998188888889999998303876767999642131--------------25678756778741666---
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAEL--------------QLQQPHVVRLETRPPNI--- 306 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El--------------~l~~~~~v~~~~~~~~~--- 306 (483)
T Consensus 22 ~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPH~TvleNv~la 101 (240)
T COG1126 22 SLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLA 101 (240)
T ss_pred CEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHH
T ss_conf 11673897899989999988899999977868878649999872254546999998557662466546553298887775
Q ss_pred ----------------------------------CCCCCCHHHHHHHHHHHCCCCEEEECCCC---CHHH-HH----HHH
Q ss_conf ----------------------------------65300018999987520599889965758---7999-99----999
Q gi|254780724|r 307 ----------------------------------EGEGEITMRDLVKNCLRMRPERIILGEVR---GPEV-LD----LLQ 344 (483)
Q Consensus 307 ----------------------------------e~~~~~t~~~ll~~aLR~~PD~IiVGEiR---g~Ea-~~----~l~ 344 (483)
T Consensus 102 p~~v~~~~k~eA~~~A~~lL~~VGL~dka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~ 181 (240)
T COG1126 102 PVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKD 181 (240)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 39972989999999999999986955666539510480788999999987179988863697543798899999999999
Q ss_pred HHHCCCCEEEHHHC
Q ss_conf 98739701020004
Q gi|254780724|r 345 AMNTGHDGSMGTIH 358 (483)
Q Consensus 345 A~~TGH~G~ltTlH 358 (483)
T Consensus 182 LA~eGmT-MivVTH 194 (240)
T COG1126 182 LAEEGMT-MIIVTH 194 (240)
T ss_pred HHHCCCE-EEEEEC
T ss_conf 9976986-999950