HHsearch alignment for GI: 254780724 and conserved domain: COG1201

>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=95.49  E-value=0.061  Score=32.20  Aligned_cols=152  Identities=16%  Similarity=0.094  Sum_probs=88.5

Q ss_pred             CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC------------------------CCCCEEEEECCHH
Q ss_conf             6998899999898622588489981888888899999983038------------------------7676799964213
Q gi|254780724|r  233 GAVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYID------------------------KDERIVTCEDTAE  288 (483)
Q Consensus       233 g~~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~------------------------~~~rivtIED~~E  288 (483)
T Consensus       236 ~~~~~~~~~~i~~~v~~~~ttLIF~NTR~~aE~l~~~L~~~~~~~i~~HHgSlSre~R~~vE~~lk~G~lravV~TSSLE  315 (814)
T COG1201         236 EELWAALYERIAELVKKHRTTLIFTNTRSGAERLAFRLKKLGPDIIEVHHGSLSRELRLEVEERLKEGELKAVVATSSLE  315 (814)
T ss_pred             CCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHH
T ss_conf             62467899999999961685899972727899999999872687556531666577899999998668862999806422


Q ss_pred             HCCC--CCCEEEEEEECCCCCCCCCCHHHHHHHHH--HHCCCCEEEECCCCCH--HHHHHHHHHHCCCCEEEHHHCCCCH
Q ss_conf             1256--78756778741666653000189999875--2059988996575879--9999999987397010200047888
Q gi|254780724|r  289 LQLQ--QPHVVRLETRPPNIEGEGEITMRDLVKNC--LRMRPERIILGEVRGP--EVLDLLQAMNTGHDGSMGTIHANNA  362 (483)
Q Consensus       289 l~l~--~~~~v~~~~~~~~~e~~~~~t~~~ll~~a--LR~~PD~IiVGEiRg~--Ea~~~l~A~~TGH~G~ltTlHa~s~  362 (483)
T Consensus       316 LGIDiG~vdlVIq~~SP~sV~----r~lQRiGRsgHr~~~~Skg~ii~~~r~dllE~~vi~~~a~~g~le-~~~i~~~~L  390 (814)
T COG1201         316 LGIDIGDIDLVIQLGSPKSVN----RFLQRIGRAGHRLGEVSKGIIIAEDRDDLLECLVLADLALEGKLE-RIKIPKNPL  390 (814)
T ss_pred             HCCCCCCCEEEEEECCCHHHH----HHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCH
T ss_conf             050247742999817938888----886850314665688642799816799999999999999718766-677887636


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             88999999755304679998999999974
Q gi|254780724|r  363 RESFGRMEAMIAMGGFTLPSQMVREIITS  391 (483)
Q Consensus       363 ~~ai~RL~~m~~~~~~~~~~~~~~~~ia~  391 (483)
T Consensus       391 DVLaq~ivg~~~~~--~~~~~~~y~~vrr  417 (814)
T COG1201         391 DVLAQQIVGMALEK--VWEVEEAYRVVRR  417 (814)
T ss_pred             HHHHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_conf             57888997999627--6989999999973