HHsearch alignment for GI: 254780724 and conserved domain: COG1201
>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=95.49 E-value=0.061 Score=32.20 Aligned_cols=152 Identities=16% Similarity=0.094 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC------------------------CCCCEEEEECCHH
Q ss_conf 6998899999898622588489981888888899999983038------------------------7676799964213
Q gi|254780724|r 233 GAVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYID------------------------KDERIVTCEDTAE 288 (483)
Q Consensus 233 g~~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~------------------------~~~rivtIED~~E 288 (483)
T Consensus 236 ~~~~~~~~~~i~~~v~~~~ttLIF~NTR~~aE~l~~~L~~~~~~~i~~HHgSlSre~R~~vE~~lk~G~lravV~TSSLE 315 (814)
T COG1201 236 EELWAALYERIAELVKKHRTTLIFTNTRSGAERLAFRLKKLGPDIIEVHHGSLSRELRLEVEERLKEGELKAVVATSSLE 315 (814)
T ss_pred CCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 62467899999999961685899972727899999999872687556531666577899999998668862999806422
Q ss_pred HCCC--CCCEEEEEEECCCCCCCCCCHHHHHHHHH--HHCCCCEEEECCCCCH--HHHHHHHHHHCCCCEEEHHHCCCCH
Q ss_conf 1256--78756778741666653000189999875--2059988996575879--9999999987397010200047888
Q gi|254780724|r 289 LQLQ--QPHVVRLETRPPNIEGEGEITMRDLVKNC--LRMRPERIILGEVRGP--EVLDLLQAMNTGHDGSMGTIHANNA 362 (483)
Q Consensus 289 l~l~--~~~~v~~~~~~~~~e~~~~~t~~~ll~~a--LR~~PD~IiVGEiRg~--Ea~~~l~A~~TGH~G~ltTlHa~s~ 362 (483)
T Consensus 316 LGIDiG~vdlVIq~~SP~sV~----r~lQRiGRsgHr~~~~Skg~ii~~~r~dllE~~vi~~~a~~g~le-~~~i~~~~L 390 (814)
T COG1201 316 LGIDIGDIDLVIQLGSPKSVN----RFLQRIGRAGHRLGEVSKGIIIAEDRDDLLECLVLADLALEGKLE-RIKIPKNPL 390 (814)
T ss_pred HCCCCCCCEEEEEECCCHHHH----HHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCH
T ss_conf 050247742999817938888----886850314665688642799816799999999999999718766-677887636
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 88999999755304679998999999974
Q gi|254780724|r 363 RESFGRMEAMIAMGGFTLPSQMVREIITS 391 (483)
Q Consensus 363 ~~ai~RL~~m~~~~~~~~~~~~~~~~ia~ 391 (483)
T Consensus 391 DVLaq~ivg~~~~~--~~~~~~~y~~vrr 417 (814)
T COG1201 391 DVLAQQIVGMALEK--VWEVEEAYRVVRR 417 (814)
T ss_pred HHHHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_conf 57888997999627--6989999999973