HHsearch alignment for GI: 254780724 and conserved domain: COG1484

Probab=95.32  E-value=0.046  Score=33.02  Aligned_cols=109  Identities=18%  Similarity=0.170  Sum_probs=61.9

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf             58848998188888889999998303876767999642131256787567787416666530001899998752059988
Q gi|254780724|r  249 IRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPER  328 (483)
Q Consensus       249 ~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~  328 (483)
T Consensus       104 ~~~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~--------~~~~~---~~~l~~--~l~~~dl  170 (254)
T COG1484         104 RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAF--------DEGRL---EEKLLR--ELKKVDL  170 (254)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH--------HCCCH---HHHHHH--HHHHCCE
T ss_conf             5882899899998799999999999998398499988599999999987--------45526---899998--8752898


Q ss_pred             EEECCCC----CH-HHHHHHHHHHCCC-CEEEHHHCCCCHHHHHHHHHH
Q ss_conf             9965758----79-9999999987397-010200047888889999997
Q gi|254780724|r  329 IILGEVR----GP-EVLDLLQAMNTGH-DGSMGTIHANNARESFGRMEA  371 (483)
Q Consensus       329 IiVGEiR----g~-Ea~~~l~A~~TGH-~G~ltTlHa~s~~~ai~RL~~  371 (483)
T Consensus       171 LIiDDlG~~~~~~~~~~~~~q~I~~r~~~~~~-~~tsN~~~~~~~~~~~  218 (254)
T COG1484         171 LIIDDIGYEPFSQEEADLLFQLISRRYESRSL-IITSNLSFGEWDELFG  218 (254)
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEECCCHHHHHHHCC
T ss_conf             99823677668815587999999999973054-2020588278886606