HHsearch alignment for GI: 254780724 and conserved domain: COG4608

>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].
Probab=95.38  E-value=0.035  Score=33.91  Aligned_cols=88  Identities=20%  Similarity=0.155  Sum_probs=54.9

Q ss_pred             HHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCH-------HHC------CC--CCCEEEEEEECCCCCCCC
Q ss_conf             622588489981888888899999983038767679996421-------312------56--787567787416666530
Q gi|254780724|r  246 IGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTA-------ELQ------LQ--QPHVVRLETRPPNIEGEG  310 (483)
Q Consensus       246 ~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~-------El~------l~--~~~~v~~~~~~~~~e~~~  310 (483)
T Consensus        35 ~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~~~~~~~~v~elL~~Vgl~~~~~~ryPh--elSG  112 (268)
T COG4608          35 SIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLSKEERRERVLELLEKVGLPEEFLYRYPH--ELSG  112 (268)
T ss_pred             EECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCC--CCCC
T ss_conf             97589878999368887787999997283888726998685311136667999999999980988778633883--0373


Q ss_pred             CCHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             0018999987520599889965758
Q gi|254780724|r  311 EITMRDLVKNCLRMRPERIILGEVR  335 (483)
Q Consensus       311 ~~t~~~ll~~aLR~~PD~IiVGEiR  335 (483)
T Consensus       113 GQrQRi~IARALal~P~liV~DEpv  137 (268)
T COG4608         113 GQRQRIGIARALALNPKLIVADEPV  137 (268)
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCH
T ss_conf             1335699999985098679743721