HHsearch alignment for GI: 254780724 and conserved domain: PRK08727
>PRK08727 hypothetical protein; Validated.
Probab=96.66 E-value=0.058 Score=32.33 Aligned_cols=162 Identities=16% Similarity=0.145 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHCCCCCHHHHHHHHHHHCCC--CCEEEECCCCCCHHHHHHHHHHHCC-CCCCEEEE--ECCHHHC-----
Q ss_conf 654667888650699889999989862258--8489981888888899999983038-76767999--6421312-----
Q gi|254780724|r 221 KDKLTLDHLVSFGAVTAEGARLLQIIGRIR--CNVLISGGTGSGKTTLLNCLTRYID-KDERIVTC--EDTAELQ----- 290 (483)
Q Consensus 221 ~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~--~nilVsG~TGSGKTT~L~al~~~i~-~~~rivtI--ED~~El~----- 290 (483)
T Consensus 13 ~~~~tfdnFi~~--~n~~~a~-l~~~~~~~~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~~~~~~l~ 89 (233)
T PRK08727 13 PSDQRFDSYIAA--PDGLLAQ-LQALAAGQSSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAGRLRDALE 89 (233)
T ss_pred CCCCCHHHCCCC--CHHHHHH-HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH
T ss_conf 972242120678--5599999-9987438888989998999998899999999999827997288447885320256775
Q ss_pred -CCCCCEEEEEEEC-CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH-----HHHHHHHCCCCEEEHHHCCCCHH
Q ss_conf -5678756778741-6666530001899998752059988996575879999-----99999873970102000478888
Q gi|254780724|r 291 -LQQPHVVRLETRP-PNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVL-----DLLQAMNTGHDGSMGTIHANNAR 363 (483)
Q Consensus 291 -l~~~~~v~~~~~~-~~~e~~~~~t~~~ll~~aLR~~PD~IiVGEiRg~Ea~-----~~l~A~~TGH~G~ltTlHa~s~~ 363 (483)
T Consensus 90 ~le~~~ll~iDDid~i~g~~~~e~aLFhL~N~~-~~~~~~ll~ts~~~P~~l~~~l~DL~SRL~~~---~~~~l~~~dD~ 165 (233)
T PRK08727 90 ALEGRSLVALDGVDSIAGQREDEVALFDFHNRA-RAAGITLLYTARQMPDGLALVLPDLRSRLSQC---IRIGLPVLDDV 165 (233)
T ss_pred HHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHH-HHCCCEEEEECCCCHHHHCCCHHHHHHHHHCC---CEEEECCCCHH
T ss_conf 310389789855011269827999999999999-86198389977989566231002199999669---22885788979
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 89999997553046799989999999
Q gi|254780724|r 364 ESFGRMEAMIAMGGFTLPSQMVREII 389 (483)
Q Consensus 364 ~ai~RL~~m~~~~~~~~~~~~~~~~i 389 (483)
T Consensus 166 ~~~~iL~~~a~~rgl~l~~~V~~Yll 191 (233)
T PRK08727 166 ARAAVLRDRAQRRGLALDEAAIDWLL 191 (233)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 99999999999869999989999999