HHsearch alignment for GI: 254780724 and conserved domain: PRK10771
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional.
Probab=97.03 E-value=0.00091 Score=44.94 Aligned_cols=78 Identities=18% Similarity=0.210 Sum_probs=48.9
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCC-CCCEEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 9862258848998188888889999998303876767999642131256-787567787416666530001899998752
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQ-QPHVVRLETRPPNIEGEGEITMRDLVKNCL 322 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~-~~~~v~~~~~~~~~e~~~~~t~~~ll~~aL 322 (483)
T Consensus 19 sl~i~~GE~v~iiG~nGaGKSTLl~~i~Gll~p~sG~I~i~G~~~~~~~~~~r~i~~v~Q~~~l--~~~ltv~eni~~~~ 96 (233)
T PRK10771 19 TLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLLINGVDHTTTPPSRRPVSMLFQENNL--FSHLTVAQNIGLGL 96 (233)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCC--CCCCCHHHHHHHHH
T ss_conf 8898899899999999981999999996599998559999999988799888887999057766--88990999998786
Q ss_pred H
Q ss_conf 0
Q gi|254780724|r 323 R 323 (483)
Q Consensus 323 R 323 (483)
T Consensus 97 ~ 97 (233)
T PRK10771 97 N 97 (233)
T ss_pred H
T ss_conf 2