HHsearch alignment for GI: 254780724 and conserved domain: PRK11147

Probab=96.74  E-value=0.002  Score=42.62  Aligned_cols=44  Identities=23%  Similarity=0.328  Sum_probs=35.2

Q ss_pred             HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCH
Q ss_conf             98622588489981888888899999983038767679996421
Q gi|254780724|r  244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTA  287 (483)
Q Consensus       244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~  287 (483)
T Consensus       339 sl~i~~Ge~ialvG~NGsGKSTLlk~l~G~l~p~~G~i~~g~~~  382 (632)
T PRK11147        339 SAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHCGTKL  382 (632)
T ss_pred             CCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf             33357887799988988427799998606668998779989987