HHsearch alignment for GI: 254780724 and conserved domain: PRK12727

Probab=96.09  E-value=0.022  Score=35.23  Aligned_cols=118  Identities=15%  Similarity=0.206  Sum_probs=57.8

Q ss_pred             HCCCCCEEEECCCCCCHHHHHHHHHH-HCCC-C-CCEEEE-ECCHHHC----CC---CCCEEEEEEECCCCCCCCCCHHH
Q ss_conf             22588489981888888899999983-0387-6-767999-6421312----56---78756778741666653000189
Q gi|254780724|r  247 GRIRCNVLISGGTGSGKTTLLNCLTR-YIDK-D-ERIVTC-EDTAELQ----LQ---QPHVVRLETRPPNIEGEGEITMR  315 (483)
Q Consensus       247 v~~~~nilVsG~TGSGKTT~L~al~~-~i~~-~-~rivtI-ED~~El~----l~---~~~~v~~~~~~~~~e~~~~~t~~  315 (483)
T Consensus       345 ~~~gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~~valit~DtyRiga~eQL~~y~~ilgvpv~~~------~~~~~l~  418 (557)
T PRK12727        345 LERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEA------DSAESLL  418 (557)
T ss_pred             HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEE------CCHHHHH
T ss_conf             5407647874377767311799999999997399818999726640879999999999839757982------8999999


Q ss_pred             HHHHHHHHCCCCEEEECCC----CCHHHHHHHHHHHCCC-CEEEHHHCCCCHHHHHHHHHHH
Q ss_conf             9998752059988996575----8799999999987397-0102000478888899999975
Q gi|254780724|r  316 DLVKNCLRMRPERIILGEV----RGPEVLDLLQAMNTGH-DGSMGTIHANNARESFGRMEAM  372 (483)
Q Consensus       316 ~ll~~aLR~~PD~IiVGEi----Rg~Ea~~~l~A~~TGH-~G~ltTlHa~s~~~ai~RL~~m  372 (483)
T Consensus       419 ~~l~~l--~~~~lvliDTaG~~~rd~~~~~~~~~l~~~~~~~~~Lvl~a~~~~~~l~~~~~~  478 (557)
T PRK12727        419 DLLERL--RDYKLVLIDTAGMGQRDRALAAQLNWLRAARQVTSLLVLPANAHFSDLDEVVRR  478 (557)
T ss_pred             HHHHHH--CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf             999983--699989994999884699999999987514776359999688998999999998