HHsearch alignment for GI: 254780724 and conserved domain: PRK13341
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.
Probab=95.48 E-value=0.017 Score=36.03 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=34.3
Q ss_pred HHHHCCCCEEEECCCCCH-HHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf 752059988996575879-9999999987397010200047888889999997553046
Q gi|254780724|r 320 NCLRMRPERIILGEVRGP-EVLDLLQAMNTGHDGSMGTIHANNARESFGRMEAMIAMGG 377 (483)
Q Consensus 320 ~aLR~~PD~IiVGEiRg~-Ea~~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~ 377 (483)
T Consensus 487 ~~~~qr~~~vl~l~~~sll~~~~~l~~~peg--gv--~~~~~~~~~~~rL~aQl~lLdp 541 (726)
T PRK13341 487 GITWQRHDRVLNLANRSLLWALEPLRAVPEG--GV--TVLCESSDDIVRLEAQLDLLDP 541 (726)
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHCCCC--CE--EEEECCHHHHHHHHHHHHHCCH
T ss_conf 3665634359983385126526778618998--66--9983788899999999874681