HHsearch alignment for GI: 254780724 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.
Probab=95.48  E-value=0.017  Score=36.03  Aligned_cols=54  Identities=17%  Similarity=0.174  Sum_probs=34.3

Q ss_pred             HHHHCCCCEEEECCCCCH-HHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf             752059988996575879-9999999987397010200047888889999997553046
Q gi|254780724|r  320 NCLRMRPERIILGEVRGP-EVLDLLQAMNTGHDGSMGTIHANNARESFGRMEAMIAMGG  377 (483)
Q Consensus       320 ~aLR~~PD~IiVGEiRg~-Ea~~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~  377 (483)
T Consensus       487 ~~~~qr~~~vl~l~~~sll~~~~~l~~~peg--gv--~~~~~~~~~~~rL~aQl~lLdp  541 (726)
T PRK13341        487 GITWQRHDRVLNLANRSLLWALEPLRAVPEG--GV--TVLCESSDDIVRLEAQLDLLDP  541 (726)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHCCCC--CE--EEEECCHHHHHHHHHHHHHCCH
T ss_conf             3665634359983385126526778618998--66--9983788899999999874681