HHsearch alignment for GI: 254780724 and conserved domain: PRK13543
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional.
Probab=97.23 E-value=0.00084 Score=45.18 Aligned_cols=44 Identities=25% Similarity=0.396 Sum_probs=36.9
Q ss_pred HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 89862258848998188888889999998303876767999642
Q gi|254780724|r 243 LQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDT 286 (483)
Q Consensus 243 l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~ 286 (483)
T Consensus 30 isf~v~~Ge~~~l~GpNGaGKTTLlr~l~Gl~~p~~G~I~~~g~ 73 (214)
T PRK13543 30 LDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGK 73 (214)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf 38898189899999999987999999997697788419999999