HHsearch alignment for GI: 254780724 and conserved domain: PRK13796

Probab=96.24  E-value=0.013  Score=36.96  Aligned_cols=81  Identities=22%  Similarity=0.343  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHH
Q ss_conf             79899999999999980981243387787982376203453155357881688840576546678886506998899999
Q gi|254780724|r  163 RDNEQLLSVCQRIVNQVGRRVDESSPICDARLLDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARL  242 (483)
Q Consensus       163 ~~~~~l~~~i~rla~~~g~~i~~~~P~~d~~lpdg~Ri~~~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~  242 (483)
T Consensus       115 ~~~~~~~~wv~~~~~~~gl~~------~d--------V~lv----S-----------ak~g~gv~~L~~----------~  155 (367)
T PRK13796        115 VKKNKVKNWLRQEAKELGLRP------VD--------VVLI----S-----------AQKGQGIDELLD----------A  155 (367)
T ss_pred             CCHHHHHHHHHHHHHHCCCCC------CC--------EEEE----E-----------CCCCCCHHHHHH----------H
T ss_conf             787899999999999759985------52--------8999----4-----------657889999999----------9


Q ss_pred             HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             89862258848998188888889999998303876767999
Q gi|254780724|r  243 LQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTC  283 (483)
Q Consensus       243 l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtI  283 (483)
T Consensus       156 i~~-~~~~~dvyvVG~tNvGKSTLiN~ll~~~~~~~~~iT~  195 (367)
T PRK13796        156 IEK-YREGRDVYVVGVTNVGKSTLINRIIKEITGEKDVITT  195 (367)
T ss_pred             HHH-HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf             998-6379858999157575899999999871678773134