HHsearch alignment for GI: 254780724 and conserved domain: PRK13830

>PRK13830 conjugal transfer protein TrbE; Provisional.

Probab=97.09  E-value=0.00042  Score=47.28  Aligned_cols=38  Identities=32%  Similarity=0.344  Sum_probs=28.0

Q ss_pred             HHCCCCCEEEECCCCCCHHHHHHHHHHHCCC--CCCEEEE
Q ss_conf             6225884899818888888999999830387--6767999
Q gi|254780724|r  246 IGRIRCNVLISGGTGSGKTTLLNCLTRYIDK--DERIVTC  283 (483)
Q Consensus       246 ~v~~~~nilVsG~TGSGKTT~L~al~~~i~~--~~rivtI  283 (483)
T Consensus       452 H~~dvGHtlIiGpTGsGKTvll~fl~aq~~ky~~~~vf~F  491 (818)
T PRK13830        452 HVDDVGHTLIFGPTGSGKSTLLALIAAQFRRYAGAQIFAF  491 (818)
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             8898650589899999889999999999864279838997