HHsearch alignment for GI: 254780724 and conserved domain: PRK13853

>PRK13853 type IV secretion system protein VirB4; Provisional.

Probab=97.13  E-value=0.00065  Score=45.95  Aligned_cols=37  Identities=27%  Similarity=0.301  Sum_probs=26.9

Q ss_pred             HCCCCCEEEECCCCCCHHHHHHHHHH----H-CCCCCCEEEE
Q ss_conf             22588489981888888899999983----0-3876767999
Q gi|254780724|r  247 GRIRCNVLISGGTGSGKTTLLNCLTR----Y-IDKDERIVTC  283 (483)
Q Consensus       247 v~~~~nilVsG~TGSGKTT~L~al~~----~-i~~~~rivtI  283 (483)
T Consensus       423 ~~d~GHt~I~G~TGsGKTtll~fL~aq~~ky~~~~~~~~~~f  464 (789)
T PRK13853        423 EHDVGMTAIFGPIGRGKTTLMTFILAMLEQSMVDRAGAVVFF  464 (789)
T ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             788774488789999889999999999997422357708999