HHsearch alignment for GI: 254780724 and conserved domain: PRK13873
>PRK13873 conjugal transfer ATPase TrbE; Provisional.
Probab=96.92 E-value=0.00074 Score=45.57 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=27.1
Q ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHCC--CCCCEEEE
Q ss_conf 22588489981888888899999983038--76767999
Q gi|254780724|r 247 GRIRCNVLISGGTGSGKTTLLNCLTRYID--KDERIVTC 283 (483)
Q Consensus 247 v~~~~nilVsG~TGSGKTT~L~al~~~i~--~~~rivtI 283 (483)
T Consensus 438 ~gdvGHtlI~GpTGsGKTvll~~l~~q~~ry~~~~vf~F 476 (815)
T PRK13873 438 VGDVGHTLVVGPTGAGKSVLLALMALQFRRYPGSQVFAF 476 (815)
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 688764389788999899999999999864489848999