HHsearch alignment for GI: 254780724 and conserved domain: PTZ00265
>PTZ00265 multidrug resistance protein (mdr1); Provisional.
Probab=95.59 E-value=0.0067 Score=38.89 Aligned_cols=34 Identities=38% Similarity=0.529 Sum_probs=30.1
Q ss_pred HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 8986225884899818888888999999830387
Q gi|254780724|r 243 LQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDK 276 (483)
Q Consensus 243 l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~ 276 (483)
T Consensus 1188 lsf~I~~GqkVaiVGrSGsGKSTii~lL~Rfydi 1221 (1467)
T PTZ00265 1188 LSFSCDSKKTTAIVGETGSGKSTFMNLLLRFYDL 1221 (1467)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 4599779988999899998399999999977632