HHsearch alignment for GI: 254780724 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=95.61 E-value=0.012 Score=37.00 Aligned_cols=151 Identities=25% Similarity=0.333 Sum_probs=88.5
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHH-----CCCCCCEE-E--------EEEECC
Q ss_conf 999989862258848998188888889999998303876767999642131-----25678756-7--------787416
Q gi|254780724|r 239 GARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAEL-----QLQQPHVV-R--------LETRPP 304 (483)
Q Consensus 239 ~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El-----~l~~~~~v-~--------~~~~~~ 304 (483)
T Consensus 202 akRAleIAaAGGHNlll~GPPGsGKTmla~r~~giLP~L~~~EalE~~~v~S~~~~l~~~~~~~rQRPFR~PHHsAS~~~ 281 (505)
T TIGR00368 202 AKRALEIAAAGGHNLLLLGPPGSGKTMLASRLQGILPPLTNEEALETARVLSLVGKLIDRKQWKRQRPFRSPHHSASKPA 281 (505)
T ss_pred CCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCC
T ss_conf 10267775313564376782496268999875105786451266667888888875765230110686778650025666
Q ss_pred CCCCC-----CCCHH--------------HHHHHHHHHCCC--CEEEECCCCCHHH-----HHHHHHHH---CCCCEEEH
Q ss_conf 66653-----00018--------------999987520599--8899657587999-----99999987---39701020
Q gi|254780724|r 305 NIEGE-----GEITM--------------RDLVKNCLRMRP--ERIILGEVRGPEV-----LDLLQAMN---TGHDGSMG 355 (483)
Q Consensus 305 ~~e~~-----~~~t~--------------~~ll~~aLR~~P--D~IiVGEiRg~Ea-----~~~l~A~~---TGH~G~lt 355 (483)
T Consensus 282 lvGGG~~P~PGEiSLAhnGvLFLDEl~EF~r~vL~~LR~PlEdg~i~iSRa~~ki~kyPA~FqL~aAmNpcPcG~~~~~~ 361 (505)
T TIGR00368 282 LVGGGSIPKPGEISLAHNGVLFLDELPEFKRKVLDALREPLEDGSISISRAKAKIFKYPARFQLVAAMNPCPCGHYGGKI 361 (505)
T ss_pred CCCCCCCCCCCCEEHHCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 40587522285120200541043222044678998717874267068863220100087245567561788776777874
Q ss_pred HHCCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEECC
Q ss_conf 00478-8888999999755304679998999999974235889998769
Q gi|254780724|r 356 TIHAN-NARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRLR 403 (483)
Q Consensus 356 TlHa~-s~~~ai~RL~~m~~~~~~~~~~~~~~~~ia~avd~iV~~~r~~ 403 (483)
T Consensus 362 ~-~c~cSp~q~~~Yl~kL---sgp~LD----------RiDl~v~v~~~~ 396 (505)
T TIGR00368 362 T-HCRCSPQQISRYLNKL---SGPFLD----------RIDLSVEVPLLP 396 (505)
T ss_pred C-CCCCCHHHHHHHHHHC---CCHHHC----------HHCCEECCCCCC
T ss_conf 4-4658978999998742---711200----------011400137888