HHsearch alignment for GI: 254780724 and conserved domain: TIGR00382

>TIGR00382 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX; InterPro: IPR004487 ClpX is a member of the HSP (heat-shock protein) 100 family. Gel filtration and electron microscopy showed that ClpX subunits associate to form a six-membered ring that is stabilized by binding of ATP or nonhydrolyzable analogs of ATP . It functions as an ATP-depedent molecular chaperone and is the regulatory subunit of the ClpXP protease . ClpXP is involved in DNA damage repair, stationary-phase gene expression, and ssrA-mediated protein quality control. To date more than 50 proteins include transcription factors, metabolic enzymes, and proteins involved in the starvation and oxidative stress responses have been identified as substrates . The N-terminal domain of ClpX is a C4-type zinc binding domain (ZBD) involved in substrate recognition. ZBD forms a very stable dimer that is essential for promoting the degradation of some typical ClpXP substrates such as lO and MuA . ; GO: 0005515 protein binding, 0005524 ATP binding, 0016887 ATPase activity, 0015031 protein transport.
Probab=96.99  E-value=0.00058  Score=46.29  Aligned_cols=68  Identities=24%  Similarity=0.223  Sum_probs=40.1

Q ss_pred             CCCCCCCEEEEEECCCCCCCHHHHHHCCC--CCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             53578816888405765466788865069--9889999989862258848998188888889999998303
Q gi|254780724|r  206 PLALDGPTLTIRKFKKDKLTLDHLVSFGA--VTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYI  274 (483)
Q Consensus       206 p~s~~G~~i~IRk~~~~~~~l~~l~~~g~--~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i  274 (483)
T Consensus       107 e~AKKVLsVAVYNHYKRl~~~~~n~~~d~~D~nve-lehleeVEL~KSNILLiGPTGSGKTLLAqTLA~~L  176 (452)
T TIGR00382       107 EQAKKVLSVAVYNHYKRLNLKEKNKKSDNGDSNVE-LEHLEEVELSKSNILLIGPTGSGKTLLAQTLARIL  176 (452)
T ss_pred             CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHC
T ss_conf             01052543241124666532430455588400023-54444433300662454688852689999999873