HHsearch alignment for GI: 254780724 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.73 E-value=0.0012 Score=44.08 Aligned_cols=77 Identities=19% Similarity=0.253 Sum_probs=43.2
Q ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 48998188888889999998303876767999642131256787567787416666530001899998752059988996
Q gi|254780724|r 252 NVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIL 331 (483)
Q Consensus 252 nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~IiV 331 (483)
T Consensus 2 ~I~ISGpPGSGktTvA~~lA~~Ls--l~~iSaG~iRelA~~~Gldl~-E~~~aee~~eIDk~iD~~~~E~A~~~~nvvlE 78 (173)
T TIGR02173 2 IITISGPPGSGKTTVAKILAEKLS--LKLISAGDIRELAEKMGLDLA-ESKYAEENPEIDKKIDRRIREIAEKEKNVVLE 78 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC--CCEECCCHHHHHHHHCCCCHH-HHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 788735896864789999998639--831202007889864298877-73443058631167537885543048966885