HHsearch alignment for GI: 254780724 and conserved domain: TIGR02525

>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364 Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii..
Probab=100.00  E-value=3.2e-37  Score=278.64  Aligned_cols=276  Identities=26%  Similarity=0.371  Sum_probs=208.7

Q ss_pred             HHCCCCCCEEEEECCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHH-------HCCCCCCCCCEEE----EEE--CC
Q ss_conf             8588332179985699189982783897176207989999999999998-------0981243387787----982--37
Q gi|254780724|r  130 LIARDDIADIMVNGSNKVFIEVNGKTVETGINFRDNEQLLSVCQRIVNQ-------VGRRVDESSPICD----ARL--LD  196 (483)
Q Consensus       130 ll~D~~VsdI~ing~~~I~ve~~G~~~~~~~~f~~~~~l~~~i~rla~~-------~g~~i~~~~P~~d----~~l--pd  196 (483)
T Consensus        18 hC~r~~vSDI~LqGG~~i~V~r~GR~~~~s~fpL~~~~l~~l~D~lFg~ei~~~v~sg~~vdraiQ-l~GD~~GryGL~R   96 (374)
T TIGR02525        18 HCERHEVSDIHLQGGSPIVVERHGRKVRASSFPLEDSELERLVDELFGPEIKPTVKSGRPVDRAIQ-LEGDENGRYGLKR   96 (374)
T ss_pred             HHCCCCCCCEEECCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE-ECCCCCCCCCCCC
T ss_conf             111686340352176855774446610134477850579998766507320010247875572001-0266556413356


Q ss_pred             CC----EEEEECCCCCC--CCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf             62----03453155357--8816888405765466788865069988999998986225884899818888888999999
Q gi|254780724|r  197 GS----RVNVIIPPLAL--DGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCL  270 (483)
Q Consensus       197 g~----Ri~~~~~p~s~--~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al  270 (483)
T Consensus        97 Ger~RfR~nf~QAt~~~~~~AislTlRvips~IP~L---~~MgiE~----DLf~alLP~~GLGLiCG~TGSGKSTl~Aai  169 (374)
T TIGR02525        97 GERVRFRCNFIQATIGKLETAISLTLRVIPSDIPDL---KKMGIEP----DLFEALLPKAGLGLICGETGSGKSTLAAAI  169 (374)
T ss_pred             CCEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCH---HHCCCCH----HHHHHHCCCCCCEEECCCCCCCHHHHHHHH
T ss_conf             761200010004415554444434420055666513---2347876----899870500378022177897289999999


Q ss_pred             HHHC---CCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH-HHCCCCEEEECCCCCHHHHH-HHHH
Q ss_conf             8303---87676799964213125678756778741666653000189999875-20599889965758799999-9999
Q gi|254780724|r  271 TRYI---DKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNC-LRMRPERIILGEVRGPEVLD-LLQA  345 (483)
Q Consensus       271 ~~~i---~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~a-LR~~PD~IiVGEiRg~Ea~~-~l~A  345 (483)
T Consensus       170 Y~~~l~t~pdRKivT~EDPvEY~L~~~~~~l~ap~Q~~I-GRDv~sFa~Glr~~GlRR~P~IiGvGE~rd~et~~AAV~A  248 (374)
T TIGR02525       170 YRHCLETYPDRKIVTYEDPVEYILGSPDDLLPAPAQSEI-GRDVESFAEGLRLAGLRRAPKIIGVGEIRDLETFQAAVLA  248 (374)
T ss_pred             HHHHCCCCCCCEEEEEECCEEEECCCCCCHHCCCCCHHC-CCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             998507488970798657721231885201027630110-6876788623201245348853441022556789999985


Q ss_pred             HHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEE--ECCCCCEEEEEEEEEEEEECC
Q ss_conf             8739701020004788888999999755304679998999999974235889998--769998789999999841498
Q gi|254780724|r  346 MNTGHDGSMGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQ--RLRDGSRRITNICEIVGMEGN  421 (483)
Q Consensus       346 ~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~~~~~~~~~~~~ia~avd~iV~~~--r~~dG~Rrv~~I~Ev~g~e~~  421 (483)
T Consensus       249 G~~GHf-~LGTLH~~spGeA~sR~l~~~---P~e~-Re~~A~dlLs~l~yiiVQ~Ll~T~DG~RqA--VREYiv~dd~  319 (374)
T TIGR02525       249 GQSGHF-CLGTLHVKSPGEAISRCLQMV---PPEM-REAIAFDLLSVLQYIIVQKLLRTTDGKRQA--VREYIVFDDE  319 (374)
T ss_pred             CCCCCC-CCCCCCCCCCHHHHHHHHHCC---CCHH-HHHHHHHHHHHHCEEEEEEEECCCCCCEEE--EEEEEEECHH
T ss_conf             156753-100113247324788875237---8225-899999998762112354331168997358--8988887525