>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..

Probab=100.00 E-value=0 Score=557.69 Aligned_cols=284 Identities=34% Similarity=0.573 Sum_probs=269.6 Q ss_pred HHCCCCCCEEEEECCCCEEE-EECCEE--EECCCCC---CCHHHHHHHHHHHHHHH--CCCCCC-CCCEEEEEECCCCEE Q ss_conf 85883321799856991899-827838--9717620---79899999999999980--981243-387787982376203 Q gi|254780724|r 130 LIARDDIADIMVNGSNKVFI-EVNGKT--VETGINF---RDNEQLLSVCQRIVNQV--GRRVDE-SSPICDARLLDGSRV 200 (483) Q Consensus 130 ll~D~~VsdI~ing~~~I~v-e~~G~~--~~~~~~f---~~~~~l~~~i~rla~~~--g~~i~~-~~P~~d~~lpdg~Ri 200 (483) T Consensus 1 ~L~~~~v~EI~iNrP~eVW~lE~~~gw~~~~~d~P~rkaLT~~~l~~La~~~A~~~nt~q~is~y~~P~LSa~LP~G~Rv 80 (328) T TIGR02788 1 FLDDEDVTEICINRPGEVWVLEGRGGWRTQRFDVPERKALTFSHLRRLARAVASFSNTKQSISEYENPILSATLPGGERV 80 (328) T ss_pred CCCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEE T ss_conf 97888840799986917999956896588887267522441899999999988765378620102286378886999479 Q ss_pred EEECCCCCCCC--CEEEEEECCCCCCCHHHHHHCCCCCH--------------------------HHHHHHHHHHCCCCC Q ss_conf 45315535788--16888405765466788865069988--------------------------999998986225884 Q gi|254780724|r 201 NVIIPPLALDG--PTLTIRKFKKDKLTLDHLVSFGAVTA--------------------------EGARLLQIIGRIRCN 252 (483) Q Consensus 201 ~~~~~p~s~~G--~~i~IRk~~~~~~~l~~l~~~g~~~~--------------------------~~~~~l~~~v~~~~n 252 (483) T Consensus 81 Q~V~PPAc~~~eTvs~tIRKpS~~~~sL~dy~~~G~F~~ar~~~~~~~~~~~d~~~~L~el~~~g~~~~Fl~~Ai~~~kn 160 (328) T TIGR02788 81 QIVIPPACENDETVSITIRKPSLVDLSLDDYEEKGFFDTARAVVVPASTELSDKDEELLELLDAGDIKEFLRLAIASRKN 160 (328) T ss_pred EEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCE T ss_conf 99806875898858999952644455479996279854477763144344346899999998628887999999873891 Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCC-CCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEE Q ss_conf 89981888888899999983038767679996421312567-87567787416666530001899998752059988996 Q gi|254780724|r 253 VLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQ-PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIL 331 (483) Q Consensus 253 ilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~-~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~IiV 331 (483) T Consensus 161 Iii~GGTgSGKTTf~kal~~~IP~~ER~iTIED~~E~~~~hhpN~V~L~ysk~v~~g~~~vt~~~Ll~scLRMrPDRI~L 240 (328) T TIGR02788 161 IIISGGTGSGKTTFLKALVKEIPKDERLITIEDTRELFLPHHPNKVHLFYSKGVGQGSAKVTPKDLLESCLRMRPDRILL 240 (328) T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHH T ss_conf 99990689718999999973276225278885201147888986456553464234435689899999971177405767 Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHCCEEEEEEE---CCCCC Q ss_conf 5758799999999987397010200047888889999997553--046799989999999742358899987---69998 Q gi|254780724|r 332 GEVRGPEVLDLLQAMNTGHDGSMGTIHANNARESFGRMEAMIA--MGGFTLPSQMVREIITSSLDVIVQTQR---LRDGS 406 (483) Q Consensus 332 GEiRg~Ea~~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~--~~~~~~~~~~~~~~ia~avd~iV~~~r---~~dG~ 406 (483) T Consensus 241 gELRG~Eaf~F~~~~nsGHpGsiTT~HA~s~~~Af~qla~l~k~s~~g~gL~~~~I~~~~~~~iDiVvq~~~dvhd~~gg 320 (328) T TIGR02788 241 GELRGDEAFDFIRAVNSGHPGSITTVHAGSPEEAFEQLALLVKESQAGLGLDYADIVKLLREVIDIVVQLERDVHDNPGG 320 (328) T ss_pred HHHCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCEEEEEECCEEECCCC T ss_conf 43033257888875205988605678718989999999998720254358888999977421144789963143356897 Q ss_pred EEEEEEE Q ss_conf 7899999 Q gi|254780724|r 407 RRITNIC 413 (483) Q Consensus 407 Rrv~~I~ 413 (483) T Consensus 321 r~~~ev~ 327 (328) T TIGR02788 321 RKITEVY 327 (328) T ss_pred CEEEEEE T ss_conf 0797762

HHsearch alignment for GI: 254780724 and conserved domain: TIGR02788