HHsearch alignment for GI: 254780724 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=95.19 E-value=0.018 Score=35.86 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=5.8
Q ss_pred HHHHHHHCCCCCHHHH
Q ss_conf 9999885656335885
Q gi|254780724|r 116 DLCNDILGYGPLQPLI 131 (483)
Q Consensus 116 ~i~~e~~glGpL~~ll 131 (483)
T Consensus 173 ~ai~~LLGl~~~e~l~ 188 (650)
T TIGR03185 173 EAIEVLLGLDLIDQLA 188 (650)
T ss_pred HHHHHHHCCHHHHHHH
T ss_conf 9999985958999999