HHsearch alignment for GI: 254780724 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.

Probab=96.10  E-value=0.0077  Score=38.44  Aligned_cols=40  Identities=23%  Similarity=0.225  Sum_probs=34.5

Q ss_pred             HHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             8622588489981888888899999983038767679996
Q gi|254780724|r  245 IIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCE  284 (483)
Q Consensus       245 ~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIE  284 (483)
T Consensus       305 ~~v~~GEi~gi~G~nGsGKsTL~k~l~Gl~~p~~G~V~~~  344 (520)
T TIGR03269       305 LEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVR  344 (520)
T ss_pred             EEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             8972896899987888878999999948878987479997