HHsearch alignment for GI: 254780724 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=97.16 E-value=0.00058 Score=46.31 Aligned_cols=43 Identities=30% Similarity=0.282 Sum_probs=36.3
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 9862258848998188888889999998303876767999642
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDT 286 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~ 286 (483)
T Consensus 18 sl~i~~Ge~~~i~GpSGsGKSTLL~~i~gl~~p~sG~i~~~g~ 60 (206)
T TIGR03608 18 NLTIEKGKMVAIVGESGSGKSTLLNIIGLLEKPDSGQVYLNGQ 60 (206)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf 7798699899998799970999999997599989759999999