HHsearch alignment for GI: 254780724 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=96.16 E-value=0.0064 Score=39.00 Aligned_cols=41 Identities=32% Similarity=0.378 Sum_probs=29.4
Q ss_pred CCEEEECCCCCCHHHHH-HHHHHHCC--CCCCEEEEECCHHHCC
Q ss_conf 84899818888888999-99983038--7676799964213125
Q gi|254780724|r 251 CNVLISGGTGSGKTTLL-NCLTRYID--KDERIVTCEDTAELQL 291 (483)
Q Consensus 251 ~nilVsG~TGSGKTT~L-~al~~~i~--~~~rivtIED~~El~l 291 (483)
T Consensus 1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~ 44 (144)
T cd00046 1 RDVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELAN 44 (144)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 99999889971799999999999997568976999746799999