HHsearch alignment for GI: 254780724 and conserved domain: cd00227

>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT). Cm-inactivating enzyme; modifies the primary (C-3) hydroxyl of the antibiotic. Related structurally to shikimate kinase II.
Probab=95.40  E-value=0.17  Score=29.00  Aligned_cols=108  Identities=13%  Similarity=0.028  Sum_probs=60.9

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCC----CEEEEEEECCCCC------CCCCCHHHHHHH
Q ss_conf             884899818888888999999830387676799964213125678----7567787416666------530001899998
Q gi|254780724|r  250 RCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQP----HVVRLETRPPNIE------GEGEITMRDLVK  319 (483)
Q Consensus       250 ~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~----~~v~~~~~~~~~e------~~~~~t~~~ll~  319 (483)
T Consensus         2 G~II~LNG~SSSGKSsiAraLQ~~l~~p~~h~~vD~f~~~~p~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~ia   79 (175)
T cd00227           2 GRIIILNGGSSAGKSSIARALQSVLAEPWLHFGVDSFIEALPLKCQDAEGGIE--FDGDGGVSPGPEFRLLEGAWYEAVA   79 (175)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             74999868998988999999998476756884185898867631368754223--4877663541569999999999999


Q ss_pred             HHHHCCCCEEEECCCCCHHH-HHHHHHHHCCCCEEEHHHCCC
Q ss_conf             75205998899657587999-999999873970102000478
Q gi|254780724|r  320 NCLRMRPERIILGEVRGPEV-LDLLQAMNTGHDGSMGTIHAN  360 (483)
Q Consensus       320 ~aLR~~PD~IiVGEiRg~Ea-~~~l~A~~TGH~G~ltTlHa~  360 (483)
T Consensus        80 a~a~aG~nvIvD~v~~~~~~l~d~~~-~L~g~~v~~VGV~C~  120 (175)
T cd00227          80 AMARAGANVIADDVFLGRAALQDCWR-SFVGLDVLWVGVRCP  120 (175)
T ss_pred             HHHHCCCCEEEEEEECCCHHHHHHHH-HHCCCCEEEEEEECC
T ss_conf             99977998898631238088999999-857992799998789