HHsearch alignment for GI: 254780724 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=100.00 E-value=7.7e-35 Score=262.03 Aligned_cols=207 Identities=24% Similarity=0.373 Sum_probs=163.2
Q ss_pred HHHHHCCCCCCCCCEEEEEEC---CCCEEEE--ECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf 999809812433877879823---7620345--31553578816888405765466788865069988999998986225
Q gi|254780724|r 175 IVNQVGRRVDESSPICDARLL---DGSRVNV--IIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRI 249 (483)
Q Consensus 175 la~~~g~~i~~~~P~~d~~lp---dg~Ri~~--~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~ 249 (483)
T Consensus 2 iK~~a~ldi~e~r~pQdG~~~~~~~~~~~~~Rvst~p-~~~Ge~vvlRll~~~~-~~~~L~~LG~~~~~~~~l~~~~~~~ 79 (264)
T cd01129 2 LKILAALDIAERRKPQDGRIRLKLKGREIDLRVSTLP-TIYGESVVLRILDKKN-QILDLEKLGLKPENLEIFRKLLEKP 79 (264)
T ss_pred EEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEECC-CCCCCEEEEEEECCCC-CCCCHHHHCCCHHHHHHHHHHHHCC
T ss_conf 4687799861335884881899989989999999475-7999769999757766-6579879579999999999997089
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCC-CCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf 884899818888888999999830387-6767999642131256787567787416666530001899998752059988
Q gi|254780724|r 250 RCNVLISGGTGSGKTTLLNCLTRYIDK-DERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPER 328 (483)
Q Consensus 250 ~~nilVsG~TGSGKTT~L~al~~~i~~-~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~ 328 (483)
T Consensus 80 ~GlilitGptGSGKtTtl~a~l~~~~~~~~~i~tiEdPvE~~~~~~~Q~~v-------~~~~g~~~~~~lr~~LR~dPDv 152 (264)
T cd01129 80 HGIILVTGPTGSGKTTTLYSALSELNTPEKNIITVEDPVEYQIPGINQVQV-------NEKAGLTFARGLRAILRQDPDI 152 (264)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEE-------CCCCCCCHHHHHHHHHCCCCCE
T ss_conf 988999789999779999999986436885089986763145688735761-------6666878999999985569998
Q ss_pred EEECCCCCHHHH-HHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEEE
Q ss_conf 996575879999-9999987397010200047888889999997553046799989999999742358899987
Q gi|254780724|r 329 IILGEVRGPEVL-DLLQAMNTGHDGSMGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQR 401 (483)
Q Consensus 329 IiVGEiRg~Ea~-~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~~~~~~~~~~~~ia~avd~iV~~~r 401 (483)
T Consensus 153 i~igEiRD~eta~~a~~aa~tGhl-V~tTlHa~~a~~~i~RL~~l------gv~~~~----l~~~l~~vi~QRL 215 (264)
T cd01129 153 IMVGEIRDAETAEIAVQAALTGHL-VLSTLHTNDAPGAITRLLDM------GIESYL----LSSALIGVIAQRL 215 (264)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCE-EEEEECCCCHHHHHHHHHHC------CCCHHH----HHHHHHHHHHHHH
T ss_conf 874688999999999999970996-99997039999999999982------999899----9999999998642