HHsearch alignment for GI: 254780724 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=97.35 E-value=0.001 Score=44.63 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=65.7
Q ss_pred HHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCH-HHCCCC---CCEEEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 8622588489981888888899999983038767679996421-312567---875677874166665300018999987
Q gi|254780724|r 245 IIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTA-ELQLQQ---PHVVRLETRPPNIEGEGEITMRDLVKN 320 (483)
Q Consensus 245 ~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~-El~l~~---~~~v~~~~~~~~~e~~~~~t~~~ll~~ 320 (483)
T Consensus 21 l~i~~Gei~~lvG~nGaGKSTl~~~i~Gl~~p~~G~i~i~G~~i~~~~~~~~~~~gi~~v~qL-----SgG~~Qrv~iar 95 (163)
T cd03216 21 LSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIAMVYQL-----SVGERQMVEIAR 95 (163)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCCEECCC-----CHHHHHHHHHHH
T ss_conf 898799899999889989999999995776898578999999999999999998799489469-----989999999999
Q ss_pred HHHCCCCEEEECCC-C--CHHH----HHHHHH-HHCCCCEEEHHHCC
Q ss_conf 52059988996575-8--7999----999999-87397010200047
Q gi|254780724|r 321 CLRMRPERIILGEV-R--GPEV----LDLLQA-MNTGHDGSMGTIHA 359 (483)
Q Consensus 321 aLR~~PD~IiVGEi-R--g~Ea----~~~l~A-~~TGH~G~ltTlHa 359 (483)
T Consensus 96 al~~~p~llilDEPt~gLD~~~~~~i~~~l~~l~~~G~t-il~vtH~ 141 (163)
T cd03216 96 ALARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVA-VIFISHR 141 (163)
T ss_pred HHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCE-EEEEECC
T ss_conf 997299999990975579999999999999999878989-9999384