HHsearch alignment for GI: 254780724 and conserved domain: cd03217
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=97.17 E-value=0.0011 Score=44.45 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=31.0
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHH--CCCCCCEEEE
Q ss_conf 986225884899818888888999999830--3876767999
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRY--IDKDERIVTC 283 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~--i~~~~rivtI 283 (483)
T Consensus 20 sl~v~~Gei~~iiGpnGaGKSTLl~~i~G~~~~~~~~G~I~~ 61 (200)
T cd03217 20 NLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILF 61 (200)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 568879989999968999999999997077777852007999