>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=96.83  E-value=0.0016  Score=43.17  Aligned_cols=37  Identities=30%  Similarity=0.294  Sum_probs=30.7

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             5884899818888888999999830387676799964
Q gi|254780724|r  249 IRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED  285 (483)
Q Consensus       249 ~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED  285 (483)
T Consensus        24 ~GEiv~liGpNGaGKSTLlk~l~Gll~p~~G~I~~~g   60 (246)
T cd03237          24 ESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIEL   60 (246)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf             7989999979997699999999778788860799898