HHsearch alignment for GI: 254780724 and conserved domain: cd03238

>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=96.52  E-value=0.0076  Score=38.49  Aligned_cols=29  Identities=31%  Similarity=0.347  Sum_probs=24.0

Q ss_conf             86225884899818888888999999830
Q gi|254780724|r  245 IIGRIRCNVLISGGTGSGKTTLLNCLTRY  273 (483)
Q Consensus       245 ~~v~~~~nilVsG~TGSGKTT~L~al~~~  273 (483)
T Consensus        16 l~i~~Ge~~~iiG~nGsGKSTLl~~~~~~   44 (176)
T cd03238          16 VSIPLNVLVVVTGVSGSGKSTLVNEGLYA   44 (176)
T ss_conf             78889989999999999899999988876