HHsearch alignment for GI: 254780724 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=97.17 E-value=0.00052 Score=46.61 Aligned_cols=40 Identities=33% Similarity=0.248 Sum_probs=35.0
Q ss_pred HHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 6225884899818888888999999830387676799964
Q gi|254780724|r 246 IGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 246 ~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 26 ~i~~Ge~~~iiG~sGsGKTTll~~i~Gl~~p~~G~I~~~g 65 (218)
T cd03255 26 SIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDG 65 (218)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 9869989999999998699999999669999964999999