HHsearch alignment for GI: 254780724 and conserved domain: cd03258
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.59 E-value=0.0028 Score=41.55 Aligned_cols=41 Identities=22% Similarity=0.278 Sum_probs=33.0
Q ss_pred HHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 86225884899818888888999999830387676799964
Q gi|254780724|r 245 IIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 245 ~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 26 l~i~~Ge~~~ivG~SGsGKSTllr~i~gL~~p~sG~I~~~g 66 (233)
T cd03258 26 LSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDG 66 (233)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 89999999999889805899999999679999980899999