HHsearch alignment for GI: 254780724 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=97.33 E-value=0.00034 Score=47.92 Aligned_cols=42 Identities=26% Similarity=0.435 Sum_probs=36.8
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 986225884899818888888999999830387676799964
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 28 sl~i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~p~~G~I~idg 69 (207)
T cd03369 28 SFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDG 69 (207)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 889869999999999998799999999987288887899999