HHsearch alignment for GI: 254780724 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=96.77 E-value=0.0062 Score=39.11 Aligned_cols=57 Identities=21% Similarity=0.208 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHCCCCCEEEECCCCCCHHH-HHHHHHHHCCCC--CCEEEEECCHHHCC
Q ss_conf 9889999989862258848998188888889-999998303876--76799964213125
Q gi|254780724|r 235 VTAEGARLLQIIGRIRCNVLISGGTGSGKTT-LLNCLTRYIDKD--ERIVTCEDTAELQL 291 (483)
Q Consensus 235 ~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT-~L~al~~~i~~~--~rivtIED~~El~l 291 (483)
T Consensus 9 ~~~~Q~~~~~~~~~~~~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~ 68 (201)
T smart00487 9 LRPYQKEAIEALLSGLRDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAE 68 (201)
T ss_pred CCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH
T ss_conf 998899999999838998899899996099999999999863389975999908599999