BLAST/PSIBLAST alignment of GI: 254780724 and GI: 159184215 at iteration 1
>gi|159184215|ref|NP_353251.2| component of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 491
>gi|159139544|gb|AAK86036.2| component of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 491
 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/427 (72%), Positives = 373/427 (87%)

Query: 54  RTPHYYEVKSTIFTTLIEMIDITQLSQYDSQSARDEIATLMNEIVSVKKITMSLDEQLDL 113
           RT  YY  KS +F+ LI+ ID++QL++ D++SAR+EI  ++N+I+++K   MS+ EQ +L
Sbjct: 65  RTEDYYNTKSQVFSALIDTIDLSQLAKLDAESAREEIRDIVNDIITIKNFAMSIAEQEEL 124

Query: 114 FEDLCNDILGYGPLQPLIARDDIADIMVNGSNKVFIEVNGKTVETGINFRDNEQLLSVCQ 173
            ED+CND+LGYGPL+PL+ARDDIADIMVNGS + FIEV GKT+E+ I FRDN QLLS+CQ
Sbjct: 125 LEDICNDVLGYGPLEPLLARDDIADIMVNGSGQTFIEVGGKTIESDIRFRDNAQLLSICQ 184

Query: 174 RIVNQVGRRVDESSPICDARLLDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFG 233
           RIV+QVGRRVDESSPICDARL DGSRVNVI PPLA+DGP LTIRKFK+DKLTLD LV FG
Sbjct: 185 RIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGPALTIRKFKRDKLTLDQLVRFG 244

Query: 234 AVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQ 293
           A+T EGA LL+IIGR+RCNV+ISGGTGSGKTTLLNCLT +IDKDER++TCEDTAELQLQQ
Sbjct: 245 AITPEGATLLKIIGRVRCNVVISGGTGSGKTTLLNCLTSFIDKDERVITCEDTAELQLQQ 304

Query: 294 PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVLDLLQAMNTGHDGS 353
           PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERI++GEVRGPEV DLLQAMNTGHDGS
Sbjct: 305 PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIVVGEVRGPEVFDLLQAMNTGHDGS 364

Query: 354 MGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRLRDGSRRITNIC 413
           MGT+HAN  RE   R+E+MIAMGGFTLP++ VREII+ S+DV++Q  RLRDGSRRIT I 
Sbjct: 365 MGTLHANTPRECLSRIESMIAMGGFTLPAKTVREIISGSIDVVIQAARLRDGSRRITQIT 424

Query: 414 EIVGMEGNVIITQDLLKYEVMGEDETGKLIGQHISTGVSRPRFWNRAAQYGEEKNLAEVL 473
           E++GMEG+VI+TQDL++YE+ GED  G+LIG+H+STG+S+P FW+RA  YGE+K LA  L
Sbjct: 425 EVIGMEGDVIVTQDLMRYEIEGEDAQGRLIGRHVSTGISKPHFWDRARYYGEDKRLAAAL 484

Query: 474 QSLEKQS 480
             +EK S
Sbjct: 485 DEMEKSS 491