RPSBLAST alignment for GI: 254780724 and conserved domain: pfam00437
>gnl|CDD|109493 pfam00437, GSPII_E, Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection. Length = 283
Score = 251 bits (644), Expect = 2e-67
Identities = 107/282 (37%), Positives = 149/282 (52%), Gaps = 16/282 (5%)
Query: 125 GPLQPLIARDDIADIMVNGSNKVFIE--VNGKTVETGINFRDNEQLLSVCQRIVNQVGRR 182
PL+ L+ +DI VN +V++ V G + I + + RI G
Sbjct: 13 IPLEALLDDPGASDIHVNPPGRVWVRFRVGGIVLRE-IPDPSPAAAMRLISRIAVMAGLD 71
Query: 183 VDESSPICDARL-LDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGAR 241
+ E P DARL L G R V PP+ G IRK LTLD L GA A+ A
Sbjct: 72 ISERRPPQDARLPLGGERFRVSTPPVVA-GEAFVIRKPSSRSLTLDDLGMTGAFDADIAE 130
Query: 242 LLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDK-DERIVTCEDTAELQLQQPHVVRLE 300
L+ + R N+L+SGGTGSGKTTLL L I+ DERIVT ED E+QL+ P+ V+L
Sbjct: 131 FLRQAVQARGNILVSGGTGSGKTTLLYALLNEINTDDERIVTIEDPVEIQLEGPNQVQLN 190
Query: 301 TRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVLDLLQAMNTGHDGSMGTIHAN 360
TR +T DL++ LR RP+RI++GE+R E D+L+A NTGH GS+ T+HAN
Sbjct: 191 TR------LAGVTFADLLRAALRQRPDRIMVGEIRDGETADILRAANTGHPGSLSTLHAN 244
Query: 361 NARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRL 402
+A + R+E + L +R I + +D++ + R
Sbjct: 245 SAAGALTRLEQLGME----LEPFEIRSSILAVVDIVQRLVRR 282