RPSBLAST alignment for GI: 254780724 and conserved domain: TIGR02533

>gnl|CDD|131585 TIGR02533, type_II_gspE, general secretory pathway protein E. This family describes GspE, the E protein of the type II secretion system, also called the main terminal branch of the general secretion pathway. This model separates GspE from the PilB protein of type IV pilin biosynthesis. Length = 486

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 26/143 (18%)

Query: 240 ARLLQIIGRIRCNVLISGGTGSGK-TTLLNCLTRYIDKDERIVTCEDTAELQLQQPHVVR 298
           +R  ++I R    +L++G TGSGK TTL   L+R    +  I+T ED  E Q        
Sbjct: 232 SRFERLIRRPHGIILVTGPTGSGKTTTLYAALSRLNTPERNILTVEDPVEYQ-------- 283

Query: 299 LETRPPNIEGEGEITMRDLV--------KNCLRMRPERIILGEVRGPEVLDL-LQAMNTG 349
                  IEG G+I +   +        +  LR  P+ I++GE+R  E   + +QA  TG
Sbjct: 284 -------IEGIGQIQVNPKIGLTFAAGLRAILRQDPDIIMVGEIRDLETAQIAIQASLTG 336

Query: 350 HDGSMGTIHANNARESFGRMEAM 372
           H   + T+H N+A  +  R+  M
Sbjct: 337 HL-VLSTLHTNDAAGAVTRLIDM 358