RPSBLAST alignment for GI: 254780724 and conserved domain: PRK13851

>gnl|CDD|172375 PRK13851, PRK13851, type IV secretion system protein VirB11; Provisional. Length = 344

 Score =  105 bits (263), Expect = 3e-23
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 33/245 (13%)

Query: 183 VDESSPICDARLLDGSRVNVIIPPLALDGP-TLTIR------------------------ 217
           V   +P+C   L  G R+ + +PP    G  +LTIR                        
Sbjct: 69  VGPRNPLCATELPGGERLQICLPPTVPSGTVSLTIRRPSSRVSELKEVSSRYDASRWNQW 128

Query: 218 ---KFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYI 274
              + ++D+L    L  +     E      ++GR+   +L+ G TGSGKTT+   L   I
Sbjct: 129 QERRKRRDQLDEAILRHYDNGDLEAFLHACVVGRL--TMLLCGPTGSGKTTMSKTLISAI 186

Query: 275 DKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEV 334
              ER++T EDT EL +   + VRL     N  G G +T   L++  LRMRP+RI+LGE+
Sbjct: 187 PPQERLITIEDTLELVIPHENHVRL-LYSKNGAGLGAVTAEHLLQASLRMRPDRILLGEM 245

Query: 335 RGPEVLDLLQAMNTGHDGSMGTIHANNARESFGRMEAMI--AMGGFTLPSQMVREIITSS 392
           R       L  + +GH GS+ TIH  N  + F ++ +++  +  G +L  + + +++ ++
Sbjct: 246 RDDAAWAYLSEVVSGHPGSISTIHGANPVQGFKKLFSLVKSSAQGASLEDRTLIDMLATA 305

Query: 393 LDVIV 397
           +DVIV
Sbjct: 306 IDVIV 310