RPSBLAST alignment for GI: 254780724 and conserved domain: COG5008

>gnl|CDD|34613 COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 375

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 8/120 (6%)

Query: 253 VLISGGTGSGKTTLLNCLTRYIDKDE--RIVTCEDTAELQLQQPHVVRLETRPPNIEGEG 310
           V+I G TGSGK+T +  +  Y +K+    I+T ED  E  + +     +  R   ++ E 
Sbjct: 130 VIIVGATGSGKSTTMAAMIGYRNKNSTGHIITIEDPIEF-IHKHKRCIVTQREVGVDTE- 187

Query: 311 EITMRDLVKNCLRMRPERIILGEVRGPEVLD-LLQAMNTGHDGSMGTIHANNARESFGRM 369
             +    +KN LR  P+ I++GEVR  E ++  +Q   TGH   M T+HANNA ++  R+
Sbjct: 188 --SWEVALKNTLRQAPDVILIGEVRSRETMEYAIQFAETGHL-CMATLHANNANQALERI 244