HHsearch alignment for GI: 254780725 and conserved domain: CHL00072

>CHL00072 chlL photochlorophyllide reductase subunit L.
Probab=99.98  E-value=2.9e-30  Score=205.23  Aligned_cols=251  Identities=14%  Similarity=0.161  Sum_probs=188.4

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCC-CHHHHHHHHHHHCCC
Q ss_conf             7999746988775689999999999626994999978798986033438998789888631845-612433765320248
Q gi|254780725|r  163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVG-RIDKAFVSRLPVFYA  241 (427)
Q Consensus       163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~-rlD~~~l~~~l~~~~  241 (427)
T Consensus         2 ~iaiyG-KGGIGKSTtsaNlsaaLA~-~GkkVl~IGcDpk~DsT~~-L~g~~~~tvld~l~~~~~~~~~~~~edvi~~G~   78 (271)
T CHL00072          2 KIAVYG-KGGIGKSTTSCNISIALAR-RGKKVLQIGCDPKHDSTFT-LTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGY   78 (271)
T ss_pred             EEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHH-HCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCC
T ss_conf             699978-9854485889999999998-7997999789973777740-069988859999975378732164999985277


Q ss_pred             CCEEEEECCCC-CC--CHHCCCHHHHHHHHHHHH--HCCCEEEECCCCCCC-HHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             98068724876-12--032079999999899985--128889973888889-8999998620125435787768899999
Q gi|254780725|r  242 ENLSILTAPAM-LS--RTYDFDEKMIVPVLDILE--QIFPLVILDVPHVWN-SWTQEVLTLSDKVVITTSLDLAGLRNSK  315 (427)
Q Consensus       242 ~gL~lL~a~~~-~~--~~~~~~~~~l~~ll~~l~--~~yd~VIiD~p~~~~-~~~~~~L~~AD~vviV~~p~~~slr~a~  315 (427)
T Consensus        79 ~gi~cvEaGGPepGvGCaGrgi~~~i-~lL~~l~~~~d~D~V~yDvlgDVVCGGFa~Pi~~Ad~~~iVts~e~malyaAN  157 (271)
T CHL00072         79 GGVDCVEAGGPPAGAGCGGYVVGETV-KLLKELNAFYEYDVILFDVLGDVVCGGFAAPLNYADYCIIITDNGFDALFAAN  157 (271)
T ss_pred             CCCEEEECCCCCCCCCCCCCCCHHHH-HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf             88466543899988777886519999-99997376213888999447765565456750008889999567088999999


Q ss_pred             HHHHHHHHCC--CCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHH----
Q ss_conf             9999999819--8767538999565898752005999999848953799068799999988479618988899989----
Q gi|254780725|r  316 NLIDVLKKLR--PADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAI----  389 (427)
Q Consensus       316 ~ll~~l~~~~--~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~----  389 (427)
T Consensus       158 nI~~~i~~~a~~~~~rl~GiI~N~~~---~~~-~v~~fa~~~g~~~i~~iPrd~-~V~~ae~~~~TviE~~p~s~~~~~~  232 (271)
T CHL00072        158 RIAASVREKARTHPLRLAGLVGNRTS---KRD-LIDKYVEACPMPVLEVLPLIE-DIRVSRVKGKTLFEMAESEPSLNYV  232 (271)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCC---CHH-HHHHHHHHCCCCEEEECCCCC-HHHHHHHCCCCEEECCCCCHHHHHH
T ss_conf             99999999730468644436522688---378-999999973996698568711-6689997488204228998247899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             999999999985221223211105899998742
Q gi|254780725|r  390 ANLLVDFSRVLMGRVTVSKPQSAMYTKIKKIFN  422 (427)
Q Consensus       390 a~~~~~La~~i~gr~~~~~~k~~~~~~l~~lf~  422 (427)
T Consensus       233 ~~~Yr~LA~~I~~n~~~~iP~pl~~~el~~ll~  265 (271)
T CHL00072        233 CDFYLNIADQLLSQPEGVVPKELPDRELFSLLS  265 (271)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf             999999999997399986688788799999999