HHsearch alignment for GI: 254780725 and conserved domain: CHL00175

Probab=100.00  E-value=0  Score=323.35  Aligned_cols=261  Identities=19%  Similarity=0.275  Sum_probs=226.8

Q ss_pred             CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCC--CCHHHHHCCCCCHHHHHHH
Q ss_conf             45675379997469887756899999999996269949999787989860334389987--8988863184561243376
Q gi|254780725|r  157 KGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPI--NSISDAIYPVGRIDKAFVS  234 (427)
Q Consensus       157 ~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~--~~l~d~l~~~~rlD~~~l~  234 (427)
T Consensus         9 ~~~m~kiIaV~s~KGGVGKTT~a~NLa~aLA~-~G~kVlliD~D~~~~n~~~~lg~~~~~~~~~~~vl~g~~~l~~~~i~   87 (279)
T CHL00175          9 VATMTRIIVITSGKGGVGKTTTTANLGMSIAR-LGYRVALIDADIGLRNLDLLLGLENRVVYTAMEVLEGECRLDQALIR   87 (279)
T ss_pred             HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEE
T ss_conf             25988699997489984489999999999997-89988999578999987532686666667476640787664301342


Q ss_pred             HHHHCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHH-CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             532024898068724876120320799999998999851-2888997388888989999986201254357877688999
Q gi|254780725|r  235 RLPVFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQ-IFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRN  313 (427)
Q Consensus       235 ~~l~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~-~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~  313 (427)
T Consensus        88 ~---~~~~~l~ll~~~~~~~-~~~~~~~~~~~ll~~l~~~~yDyiiID~ppgl~~~~~~al~aad~viIvttpe~~al~d  163 (279)
T CHL00175         88 D---KRWPNLSLLPISKNRQ-RYNVTRKNMNMLVDSLKERNYDYILIDCPAGIDVGFINAIAPAKEAIVVTTPEITAIRD  163 (279)
T ss_pred             C---CCCCCEEEEECCCHHH-HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHH
T ss_conf             5---7778779997897054-45741999999999997279999998189988899999999789069978997899999


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCC---CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf             99999999981987675389995658987---520059999998489537990687999999884796189888999899
Q gi|254780725|r  314 SKNLIDVLKKLRPADKPPYLVLNQVKTPK---KPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIA  390 (427)
Q Consensus       314 a~~ll~~l~~~~~~~~~~~iVlNr~~~~~---~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a  390 (427)
T Consensus       164 a~~~i~~~~~~~~--~~~~lvvN~~~~~~~~~~~~~~~~~~~~~l~v~~lg~IP~D~~v-~~a~~~G~Pvv~~~P~S~~a  240 (279)
T CHL00175        164 ADRVAGLLEANGI--YNIKLLVNRVRPDMIKANDMMSVRDVQEMLGIPLLGAIPEDENV-IISTNRGEPLVLKKKLTLSG  240 (279)
T ss_pred             HHHHHHHHHHCCC--CCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHH-HHCCCCCEEEEEECCCCHHH
T ss_conf             9999999997599--86213533564554354553449999997199346576787789-86130690589849999999


Q ss_pred             HHHHHHHHHHHCCCCC----CCCCCCHHHHHHHHHHHHH
Q ss_conf             9999999998522122----3211105899998742340
Q gi|254780725|r  391 NLLVDFSRVLMGRVTV----SKPQSAMYTKIKKIFNMKC  425 (427)
Q Consensus       391 ~~~~~La~~i~gr~~~----~~~k~~~~~~l~~lf~rk~  425 (427)
T Consensus       241 ~a~~~iA~~l~~~~~~~~~~~~~~~~~~~kl~~~f~~~~  279 (279)
T CHL00175        241 IAFENAARRLVGKQVYFIDLDSPSKGPLKRLRRFFLGRS  279 (279)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf             999999999957876766555445659999999856689