HHsearch alignment for GI: 254780725 and conserved domain: COG0745

>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].

Probab=99.29  E-value=2.9e-10  Score=82.24  Aligned_cols=116  Identities=16%  Similarity=0.246  Sum_probs=95.7

Q ss_pred             EEEECCHHHHHHHHHHHHHHHHHHCEEEEEC-CCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             9983898999999988641100202237306-998999999861899849999805987677889998885328998089
Q gi|254780725|r   32 HVFCVTDTLYSVVERSKIDPRMSQVNMRITR-GSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVI  110 (427)
Q Consensus        32 ~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~-g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Vi  110 (427)
T Consensus         4 LiveDd~~i~~~l~~~-----L~~~G~~v~~~~~~~~a~~~~~~~--~dlviLD~~lP~~dG~~~~~~iR~~~~~~~PIi   76 (229)
T COG0745           4 LLVEDDPELAELLKEY-----LEEEGYEVDVAADGEEALEAAREQ--PDLVLLDLMLPDLDGLELCRRLRAKKGSGPPII   76 (229)
T ss_pred             EEEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHCC--CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEE
T ss_conf             9991888999999999-----987597899978989999997269--999999889998568999999985168999889


Q ss_pred             EEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCC
Q ss_conf             98168718999999976562643189998999997631023322
Q gi|254780725|r  111 VIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQE  154 (427)
Q Consensus       111 vig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~  154 (427)
T Consensus        77 ~Lta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~  120 (229)
T COG0745          77 VLTARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNA  120 (229)
T ss_pred             EEECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             99668728889999975634233488998999999999967365